RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 TMEM98Q9Y2Y6 226 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 LRRK1Q38SD2 2015 aa8.11□□□□□ -1.11
USP48-207ENST00000471752 UTP20O75691 2785 aaKnown RBP8.11□□□□□ -1.11
USP48-207ENST00000471752 TRBV23OR9-2A0A075B6M9 112 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 A0A1W2PQC6 194 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 NPIPB15A6NHN6 443 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 TPP1O14773 563 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 HTRA2O43464 458 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 B4GAT1O43505 415 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 MBD3O95983 291 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 CEACAM5P06731 702 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 GP1BAP07359 652 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 AK4P27144 223 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 ACTN2P35609 894 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 TRIM23P36406 574 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 ETV5P41161 510 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 HCAR3P49019 387 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 DUSP3P51452 185 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 AIF1P55008 147 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 SLC25A11Q02978 314 aaKnown RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 BCL2L1Q07817 233 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 IL10RBQ08334 325 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 NIPAL4Q0D2K0 466 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 SLC10A2Q12908 348 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 LBRQ14739 615 aaKnown RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 ACOX1Q15067 660 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 DPYSL2Q16555 572 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 KIAA1614Q5VZ46 1190 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 PNCKQ6P2M8 343 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 ZNF574Q6ZN55 896 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 Q6ZVL8 140 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 TRIM74Q86UV6 250 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 GPR156Q8NFN8 814 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 HCAR2Q8TDS4 363 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 PDCD6IPQ8WUM4 868 aaKnown RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 PMEPA1Q969W9 287 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 ZNF641Q96N77 438 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 DEPDC7Q96QD5 511 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 PSKH2Q96QS6 385 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 DUSP23Q9BVJ7 150 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 NUP85Q9BW27 656 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 CINPQ9BW66 212 aaPredicted RBP8.1□□□□□ -1.11
USP48-207ENST00000471752 ATP13A3Q9H7F0 1226 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 SP110Q9HB58 689 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 CYP4F12Q9HCS2 524 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.1□□□□□ -1.11
USP48-207ENST00000471752 KLQ9UEF7 1012 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 NENFQ9UMX5 172 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 RNF215Q9Y6U7 377 aa8.1□□□□□ -1.11
USP48-207ENST00000471752 PRRC2CQ9Y520 2896 aaKnown RBP8.09□□□□□ -1.11
USP48-207ENST00000471752 SMTNL1A8MU46 457 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 H3BM21 787 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 KLK10O43240 276 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 RNF8O76064 485 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 TNFSF15O95150 251 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 RASGRP1O95267 797 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 EML2O95834 649 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 SOD1P00441 154 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 SERPINC1P01008 464 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PRLP01236 227 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 GYPCP04921 128 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 CYP1A2P05177 515 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 FGF1P05230 155 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 RPLP0P05388 317 aaKnown RBP8.09□□□□□ -1.11
USP48-207ENST00000471752 CTSEP14091 401 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 WT1P19544 449 aaPredicted RBP8.09□□□□□ -1.11
USP48-207ENST00000471752 ITIH1P19827 911 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 MPSTP25325 297 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PCK1P35558 622 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 GJC1P36383 396 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PEX5P50542 639 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 MAZP56270 477 aaKnown RBP8.09□□□□□ -1.11
USP48-207ENST00000471752 OR1D5P58170 312 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 SKOR1P84550 965 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 CFHR1Q03591 330 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 NSUN2Q08J23 767 aaKnown RBP eCLIP8.09□□□□□ -1.11
USP48-207ENST00000471752 ELP6Q0PNE2 266 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 LY6DQ14210 128 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PTK2BQ14289 1009 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 ACAP1Q15027 740 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 AGERQ15109 404 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 HS1BP3Q53T59 392 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 NKAIN2Q5VXU1 208 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 ERAP2Q6P179 960 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 BRAT1Q6PJG6 821 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 OGFOD3Q6PK18 319 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 LRRC69Q6ZNQ3 347 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 RBM44Q6ZP01 1051 aaKnown RBP8.09□□□□□ -1.11
USP48-207ENST00000471752 USP53Q70EK8 1073 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 TECPR1Q7Z6L1 1165 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 TAF8Q7Z7C8 310 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PQLC3Q8N755 202 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 FAM46DQ8NEK8 389 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 FAM174AQ8TBP5 190 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 BTN2A2Q8WVV5 523 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 PIH1D2Q8WWB5 315 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 SCAMP4Q969E2 229 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 RNF31Q96EP0 1072 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 WDR92Q96MX6 357 aa8.09□□□□□ -1.11
USP48-207ENST00000471752 RBM15Q96T37 977 aaKnown RBP eCLIP8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms