RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CNGA3Q16281 694 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 UAP1L1Q3KQV9 507 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 ITPRIPL1Q6GPH6 555 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 Q6ZSR6 202 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 SPATS2Q86XZ4 545 aaKnown RBP15.33■□□□□ 0.04
SDC3-203ENST00000471567 RAVER1Q8IY67 606 aaKnown RBP15.33■□□□□ 0.04
SDC3-203ENST00000471567 LPCAT1Q8NF37 534 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 OR2I1PQ8NGU4 316 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 COQ10AQ96MF6 247 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 TRIB3Q96RU7 358 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 LYSMD1Q96S90 227 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 ELF4Q99607 663 aaPredicted RBP15.33■□□□□ 0.04
SDC3-203ENST00000471567 FAM118BQ9BPY3 351 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 C10orf88Q9H8K7 445 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 USP29Q9HBJ7 922 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 GPR27Q9NS67 375 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 TRMT1Q9NXH9 659 aaKnown RBP15.33■□□□□ 0.04
SDC3-203ENST00000471567 COQ6Q9Y2Z9 468 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 PCDHGB2Q9Y5G2 931 aa15.33■□□□□ 0.04
SDC3-203ENST00000471567 A0A1B0GTQ1 180 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 POM121BA6NF01 834 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 C5orf60A6NFR6 353 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 CAPN8A6NHC0 703 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 A8MX80 341 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 ANKRD66B4E2M5 251 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 KIF5CO60282 957 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 MT-CYBP00156 380 aaPredicted RBP15.32■□□□□ 0.04
SDC3-203ENST00000471567 EPOP01588 193 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 CTPS1P17812 591 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 LHCGRP22888 699 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 IGFALSP35858 605 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 RXRGP48443 463 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 YPEL5P62699 121 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 ACOX1Q15067 660 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 QPCTQ16769 361 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 WSCD2Q2TBF2 565 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 ZNF569Q5MCW4 686 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 ANKRD20A2Q5SQ80 823 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 FAM182AQ5T1J6 154 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 ANKRD20A1Q5TYW2 823 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 ANKRD20A3Q5VUR7 823 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 CCDC70Q6NSX1 233 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 OR13H1Q8NG92 308 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 SPATA22Q8NHS9 363 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 MAIP1Q8WWC4 291 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 IFT43Q96FT9 208 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 SPATA13Q96N96 652 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 PPP1R2P1Q96PQ5 205 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 MLPHQ9BV36 600 aaPredicted RBP15.32■□□□□ 0.04
SDC3-203ENST00000471567 GBA3Q9H227 469 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 IL21RQ9HBE5 538 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 MBNL1Q9NR56 388 aaKnown RBP15.32■□□□□ 0.04
SDC3-203ENST00000471567 TM7SF3Q9NS93 570 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 RSPH14Q9UHP6 348 aa15.32■□□□□ 0.04
SDC3-203ENST00000471567 FNDC3AQ9Y2H6 1198 aaKnown RBP15.32■□□□□ 0.04
SDC3-203ENST00000471567 R3HDM2Q9Y2K5 976 aaKnown RBP15.32■□□□□ 0.04
SDC3-203ENST00000471567 CFAP54Q96N23 3096 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 PCDHGA12O60330 932 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 PMPCBO75439 489 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 ANXA9O76027 345 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 NDST3O95803 873 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 ALPIP09923 528 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 GM2AP17900 193 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 STIP1P31948 543 aaKnown RBP15.31■□□□□ 0.04
SDC3-203ENST00000471567 ARRB1P49407 418 aaPredicted RBP15.31■□□□□ 0.04
SDC3-203ENST00000471567 CCT8P50990 548 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 MPP3Q13368 585 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 SUZ12Q15022 739 aaKnown RBP15.31■□□□□ 0.04
SDC3-203ENST00000471567 IRF4Q15306 451 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 CRTC1Q6UUV9 634 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 KDELC1Q6UW63 502 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 DBX2Q6ZNG2 339 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 PTAR1Q7Z6K3 402 aaPredicted RBP15.31■□□□□ 0.04
SDC3-203ENST00000471567 SRPK1Q96SB4 655 aaKnown RBP15.31■□□□□ 0.04
SDC3-203ENST00000471567 ZKSCAN5Q9Y2L8 839 aa15.31■□□□□ 0.04
SDC3-203ENST00000471567 SPTY2D1-AS1A0A0U1RR47 76 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 LOC285095A0A1B0GVY8 99 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 LIASO43766 372 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 CEP104O60308 925 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 CD59P13987 128 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 CSRP1P21291 193 aaKnown RBP15.3■□□□□ 0.04
SDC3-203ENST00000471567 TNNT3P45378 269 aaPredicted RBP15.3■□□□□ 0.04
SDC3-203ENST00000471567 GEMP55040 296 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 WNT3AP56704 352 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 PTSQ03393 145 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 MTM1Q13496 603 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 PTK2BQ14289 1009 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 PRPSAP1Q14558 356 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 PCSK7Q16549 785 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 LRRC66Q68CR7 880 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 HSD11B1LQ7Z5J1 315 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 TECPR1Q7Z6L1 1165 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 TSPAN33Q86UF1 283 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 SLC22A18ASQ8N1D0 253 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 SLC35F6Q8N357 371 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 ASCC3Q8N3C0 2202 aaKnown RBP15.3■□□□□ 0.04
SDC3-203ENST00000471567 NUS1Q96E22 293 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 DTD2Q96FN9 168 aa15.3■□□□□ 0.04
SDC3-203ENST00000471567 OXNAD1Q96HP4 312 aaPredicted RBP15.3■□□□□ 0.04
SDC3-203ENST00000471567 PBKQ96KB5 322 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms