RNA–Protein interactions for RNA: ENST00000471350.1

COMMD3-209, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-209ENST00000471350 TMEM160Q9NX00 188 aa1.97□□□□□ -2.09
COMMD3-209ENST00000471350 SRP68Q9UHB9 627 aaKnown RBP1.97□□□□□ -2.09
COMMD3-209ENST00000471350 RCOR1Q9UKL0 485 aa1.97□□□□□ -2.09
COMMD3-209ENST00000471350 FAF1Q9UNN5 650 aaPredicted RBP1.97□□□□□ -2.09
COMMD3-209ENST00000471350 NFE2L3Q9Y4A8 694 aa1.97□□□□□ -2.09
COMMD3-209ENST00000471350 A3GALT2U3KPV4 340 aa1.97□□□□□ -2.09
COMMD3-209ENST00000471350 A0A1B0GU03 582 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 hCG_1642624A0A1W2PR95 340 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 SH2D7A6NKC9 451 aaPredicted RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 HSPB2A8KAH6 182 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PMS2P5A8MQ11 134 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PEX12O00623 359 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 TUBBP07437 444 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 INHBAP08476 426 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ZNF883P0CG24 379 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 CD53P19397 219 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 CD72P21854 359 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 NR0B1P51843 470 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 TUBB4BP68371 445 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PDE1BQ01064 536 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 GRIK2Q13002 908 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PPIGQ13427 754 aaKnown RBP eCLIP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PRKG1Q13976 671 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 NAA25Q14CX7 972 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 EFNB3Q15768 340 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 HSPB2Q16082 182 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PDCD2Q16342 344 aaPredicted RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ZNF876PQ49A33 203 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 C14orf177Q52M58 125 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 GPATCH4Q5T3I0 446 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 SLC35E4Q6ICL7 350 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ARHGAP11AQ6P4F7 1023 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 KCTD18Q6PI47 426 aaPredicted RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 CPLX2Q6PUV4 134 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 CEACAM20Q6UY09 585 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 SLC36A4Q6YBV0 504 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 B3GNT6Q6ZMB0 384 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 KCTD8Q6ZWB6 473 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 STXBP4Q6ZWJ1 553 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 TAOK1Q7L7X3 1001 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ODF3L1Q8IXM7 274 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 KIAA2013Q8IYS2 634 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 LYG1Q8N1E2 194 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ZCCHC9Q8N567 271 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 USP38Q8NB14 1042 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 OR10V1Q8NGI7 309 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 CEP70Q8NHQ1 597 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 HCAR2Q8TDS4 363 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 TRAPPC12Q8WVT3 735 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 RAB40AQ8WXH6 277 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 SNAPC3Q92966 411 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 FBXL8Q96CD0 374 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 SH3GL2Q99962 352 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 MXRA8Q9BRK3 442 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 GFRA4Q9GZZ7 299 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ZNF700Q9H0M5 742 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 SLC32A1Q9H598 525 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 STN1Q9H668 368 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 EPHX3Q9H6B9 360 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 UPF2Q9HAU5 1272 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PLCB1Q9NQ66 1216 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 KLHL1Q9NR64 748 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 TLR8Q9NR97 1041 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 MAP3K20Q9NYL2 800 aaKnown RBP1.96□□□□□ -2.1
COMMD3-209ENST00000471350 IL1RAPL1Q9NZN1 696 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PADI1Q9ULC6 663 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 PSAT1Q9Y617 370 aa1.96□□□□□ -2.1
COMMD3-209ENST00000471350 ADGRF5Q8IZF2 1346 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 A0A0U1RQF3 1178 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 IPO5O00410 1097 aaKnown RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 TSPAN3O60637 253 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 WDR1O75083 606 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 FAM155BO75949 473 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 IRF1P10914 325 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 ETFAP13804 333 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 RXRAP19793 462 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 POU1F1P28069 291 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 ALDH4A1P30038 563 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 GPD2P43304 727 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 HTR3AP46098 478 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 MMP14P50281 582 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 PAPOLAP51003 745 aaKnown RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 GAGE5Q13069 117 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 GAGE6Q13070 117 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 TAF11Q15544 211 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 TCTN1Q2MV58 587 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 SERTAD4-AS1Q5TG53 156 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 TTI2Q6NXR4 508 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 SLC27A1Q6PCB7 646 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 MOB3CQ70IA8 216 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 ZSCAN2Q7Z7L9 614 aaPredicted RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 FAM160B2Q86V87 743 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 HERC6Q8IVU3 1022 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 WDR63Q8IWG1 891 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 ADAD2Q8NCV1 583 aaKnown RBP1.95□□□□□ -2.1
COMMD3-209ENST00000471350 SLC24A4Q8NFF2 622 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 BEST2Q8NFU1 509 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 BBS10Q8TAM1 723 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 POF1BQ8WVV4 589 aa1.95□□□□□ -2.1
COMMD3-209ENST00000471350 ANKRD9Q96BM1 317 aaPredicted RBP1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms