RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 GLDCP23378 1020 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 POLD2P49005 469 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 LIMK2P53671 638 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 SEC13P55735 322 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 ILF2Q12905 390 aaKnown RBP17.57■□□□□ 0.4
HSPG2-208ENST00000471322 THOC5Q13769 683 aaKnown RBP17.57■□□□□ 0.4
HSPG2-208ENST00000471322 CCINQ13939 588 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 SEPT6Q14141 434 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 FSCBQ5H9T9 825 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 RNF43Q68DV7 783 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 ESRP1Q6NXG1 681 aaKnown RBP17.57■□□□□ 0.4
HSPG2-208ENST00000471322 NDUFAF2Q8N183 169 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 CALML6Q8TD86 181 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 LRRC8CQ8TDW0 803 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 EZH1Q92800 747 aaPredicted RBP17.57■□□□□ 0.4
HSPG2-208ENST00000471322 ACDQ96AP0 544 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 GRAMD1AQ96CP6 724 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 CABS1Q96KC9 395 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 SRPK1Q96SB4 655 aaKnown RBP17.57■□□□□ 0.4
HSPG2-208ENST00000471322 FAM167BQ9BTA0 163 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 PLLPQ9Y342 182 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 MIA3Q5JRA6 1907 aa17.57■□□□□ 0.4
HSPG2-208ENST00000471322 HOXC11O43248 304 aaPredicted RBP17.56■□□□□ 0.4
HSPG2-208ENST00000471322 TULP3O75386 442 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 DHRS4L1P0CG22 281 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 TAC1P20366 129 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 MZF1P28698 734 aaPredicted RBP17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ARCN1P48444 511 aaKnown RBP17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ARF5P84085 180 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 MSLNQ13421 630 aaPredicted RBP17.56■□□□□ 0.4
HSPG2-208ENST00000471322 SLC12A1Q13621 1099 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 IHHQ14623 411 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 CNGA3Q16281 694 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 TSTD2Q5T7W7 516 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 CACNA2D3Q8IZS8 1091 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ZNF557Q8N988 423 aaPredicted RBP17.56■□□□□ 0.4
HSPG2-208ENST00000471322 FIBINQ8TAL6 211 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ISL2Q96A47 359 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ALG14Q96F25 216 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ZNF778Q96MU6 729 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 AGAP2Q99490 1192 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 NOD2Q9HC29 1040 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 ZDHHC4Q9NPG8 344 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 POLR3BQ9NW08 1133 aaPredicted RBP17.56■□□□□ 0.4
HSPG2-208ENST00000471322 IL1RAPL1Q9NZN1 696 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 DCDC2Q9UHG0 476 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 RIMKLBQ9ULI2 386 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 CLEC4EQ9ULY5 219 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 CACNA1IQ9P0X4 2223 aa17.56■□□□□ 0.4
HSPG2-208ENST00000471322 KMT2EQ8IZD2 1858 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 MROH6A6NGR9 719 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 VAPBO95292 243 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 CSKP41240 450 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 ETV4P43268 484 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SERPINB8P50452 374 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SCNN1BP51168 640 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SLC20A2Q08357 652 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 MTAPQ13126 283 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 GAS6Q14393 721 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 INSCQ1MX18 579 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 KYAT3Q6YP21 454 aaKnown RBP17.55■□□□□ 0.4
HSPG2-208ENST00000471322 KIAA0408Q6ZU52 694 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 PIGWQ7Z7B1 504 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 TRIM42Q8IWZ5 723 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 ETFBKMTQ8IXQ9 262 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 LMNTD2Q8IXW0 634 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 DTWD2Q8NBA8 298 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 PTPRN2Q92932 1015 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 CLDN23Q96B33 292 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SEC16BQ96JE7 1060 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 OSBPL6Q9BZF3 934 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SLC13A1Q9BZW2 595 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SPATA6Q9NWH7 488 aaPredicted RBP17.55■□□□□ 0.4
HSPG2-208ENST00000471322 SLC17A6Q9P2U8 582 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 GRID1Q9ULK0 1009 aa17.55■□□□□ 0.4
HSPG2-208ENST00000471322 TTC24A2A3L6 582 aaPredicted RBP17.54■□□□□ 0.4
HSPG2-208ENST00000471322 TMCC1O94876 653 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 ALDOAP04075 364 aaKnown RBP17.54■□□□□ 0.4
HSPG2-208ENST00000471322 MPOP05164 745 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 TYK2P29597 1187 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 FOXN2P32314 431 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 PLK1P53350 603 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 QPCTQ16769 361 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 ANKS4BQ8N8V4 417 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 TRIB3Q96RU7 358 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 ADGRE3Q9BY15 652 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 PITPNM3Q9BZ71 974 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 RHOJQ9H4E5 214 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 PCMTD2Q9NV79 361 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 C2orf42Q9NWW7 574 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 SLC17A7Q9P2U7 560 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 DEC1Q9P2X7 70 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 VPS51Q9UID3 782 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 CACNA1HO95180 2353 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 TBC1D3BA6NDS4 549 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 TPP1O14773 563 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 SLC7A4O43246 635 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 SNAP91O60641 907 aa17.54■□□□□ 0.4
HSPG2-208ENST00000471322 GLRA3O75311 464 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms