RNA–Protein interactions for RNA: ENST00000471044.1

CCNL1-213, Transcript of cyclin L1, humanhuman

TSL 2

Gene CCNL1, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-213ENST00000471044 DUSP23Q9BVJ7 150 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 PCDH12Q9NPG4 1184 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 RCOR3Q9P2K3 495 aaPredicted RBP12.56□□□□□ -0.4
CCNL1-213ENST00000471044 SEPT3Q9UH03 358 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 KLF15Q9UIH9 416 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 ATP8A1Q9Y2Q0 1164 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 COQ6Q9Y2Z9 468 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 NAV2Q8IVL1 2488 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 RP1P56715 2156 aa12.56□□□□□ -0.4
CCNL1-213ENST00000471044 SSU72P8A0A1W2PR75 194 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 K7ESM1 405 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 TRAFD1O14545 582 aaPredicted RBP12.55□□□□□ -0.4
CCNL1-213ENST00000471044 AQP9O43315 295 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 MAFKO60675 156 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 PEX11BO96011 259 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 H2AFZP0C0S5 128 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 C6P13671 934 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 JUPP14923 745 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 CR2P20023 1033 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 IL4RP24394 825 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 HSPA9P38646 679 aaKnown RBP12.55□□□□□ -0.4
CCNL1-213ENST00000471044 MMP12P39900 470 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 PEX5P50542 639 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 SCNN1BP51168 640 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 ARSEP51690 589 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 THOP1P52888 689 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 E2F1Q01094 437 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 CBLBQ13191 982 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 KRT81Q14533 505 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 LRRC14Q15048 493 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 IRF4Q15306 451 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 SLC18A3Q16572 532 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 ASTE1Q2TB18 679 aaPredicted RBP12.55□□□□□ -0.4
CCNL1-213ENST00000471044 HES3Q5TGS1 186 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 SPECC1LQ69YQ0 1117 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 MACC1Q6ZN28 852 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 H2AFVQ71UI9 128 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 APOLD1Q96LR9 279 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 TBATAQ96M53 351 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 NSMCE3Q96MG7 304 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 DNAJC7Q99615 494 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 TSPY26PQ9H489 355 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 USP29Q9HBJ7 922 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 UVRAGQ9P2Y5 699 aa12.55□□□□□ -0.4
CCNL1-213ENST00000471044 LY6G6EA0A0G2JKS1 128 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 A0A1W2PQ67 120 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 TMEM110-MUSTN1A8MSY1 372 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 TPP1O14773 563 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 NEBLO76041 1014 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 PROSCO94903 275 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 CKMT1AP12532 417 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 LIG3P49916 1009 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 DUSP3P51452 185 aaPredicted RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 CDH6P55285 790 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 CLDN6P56747 220 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 POLR2LP62875 67 aaKnown RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 DHX9Q08211 1270 aaKnown RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 RALGDSQ12967 914 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 ZNF235Q14590 738 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 WSCD2Q2TBF2 565 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 ZCCHC8Q6NZY4 707 aaKnown RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 LIPIQ6XZB0 460 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 LRRC49Q8IUZ0 686 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 PHACTR4Q8IZ21 702 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 BBS5Q8N3I7 341 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 PGBD5Q8N414 524 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 LMX1AQ8TE12 382 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 BBC3Q96PG8 261 aaPredicted RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 NUDCD1Q96RS6 583 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 MGME1Q9BQP7 344 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 APOOQ9BUR5 198 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 CTTNBP2NLQ9P2B4 639 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 SPASTQ9UBP0 616 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 LCMT1Q9UIC8 334 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 SALL4Q9UJQ4 1053 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 PNMA8BQ9ULN7 279 aaPredicted RBP12.54□□□□□ -0.4
CCNL1-213ENST00000471044 U3KQA8 63 aa12.54□□□□□ -0.4
CCNL1-213ENST00000471044 ARHGEF17Q96PE2 2063 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-213ENST00000471044 HTRA2O43464 458 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-213ENST00000471044 LZTS3O60299 673 aaPredicted RBP12.53□□□□□ -0.4
CCNL1-213ENST00000471044 SOCS5O75159 536 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 PRKCGP05129 697 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 GP1BAP07359 652 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 CD48P09326 243 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 TMEM253P0C7T8 217 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 SSR1P43307 286 aaKnown RBP12.53□□□□□ -0.4
CCNL1-213ENST00000471044 CYP4F3Q08477 520 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 TARDBPQ13148 414 aaKnown RBP eCLIP12.53□□□□□ -0.4
CCNL1-213ENST00000471044 MTM1Q13496 603 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 DPYSL3Q14195 570 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 PAFAH1B3Q15102 231 aaKnown RBP12.53□□□□□ -0.4
CCNL1-213ENST00000471044 ATP13A4Q4VNC1 1196 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 RALGPS1Q5JS13 557 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 NCBP2-AS2Q69YL0 99 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 DPPA4Q7L190 304 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 VSTM4Q8IW00 320 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 RBFAQ8N0V3 343 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 ATPAF2Q8N5M1 289 aa12.53□□□□□ -0.4
CCNL1-213ENST00000471044 NSMCE1Q8WV22 266 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms