RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 SDCCAG8Q86SQ7 713 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 MMAAQ8IVH4 418 aaKnown RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 AGGF1Q8N302 714 aaeCLIP9.79□□□□□ -0.84
CCM2-204ENST00000470837 SYNPOQ8N3V7 929 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 RIBC1Q8N443 379 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 PPM1NQ8N819 430 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 TXNDC5Q8NBS9 432 aaKnown RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 OR2T3Q8NH03 318 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 OR2W6PQ8NHA6 318 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 SPOCK2Q92563 424 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 PBXIP1Q96AQ6 731 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 MRRFQ96E11 262 aaKnown RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 ACOX2Q99424 681 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 NELL2Q99435 816 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 TTC1Q99614 292 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 GABRG3Q99928 467 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 OMDQ99983 421 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 WDR83Q9BRX9 315 aaKnown RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 ZDHHC4Q9NPG8 344 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 MED4Q9NPJ6 270 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 RAD18Q9NS91 495 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 VPS18Q9P253 973 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 PSMC3IPQ9P2W1 217 aaPredicted RBP9.79□□□□□ -0.84
CCM2-204ENST00000470837 FETUBQ9UGM5 382 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 RABGEF1Q9UJ41 708 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 PPM1HQ9ULR3 514 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 DOCK8Q8NF50 2099 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 SHROOM3Q8TF72 1996 aa9.79□□□□□ -0.84
CCM2-204ENST00000470837 BRWD1Q9NSI6 2320 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 IQANK1A0A1B0GTG1 560 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 TSPAN11A1L157 253 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 MROH6A6NGR9 719 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 GOLGA8KD6RF30 607 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SLC7A4O43246 635 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 LDB2O43679 373 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 TCEA3O75764 348 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SASH3O75995 380 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 KRT37O76014 449 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 KRT38O76015 456 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ALDH1A2O94788 518 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SHBGP04278 402 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 PRKCGP05129 697 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 CTSLP07711 333 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ALPIP09923 528 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ERVK-10P10266 1014 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 C5AR1P21730 350 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 PMLP29590 882 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 VIPR1P32241 457 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 HMGCLP35914 325 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 PPARGP37231 505 aaPredicted RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 SERPINB9P50453 376 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 TMPRSS15P98073 1019 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ZNF844Q08AG5 666 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 CAMK2GQ13555 558 aaPredicted RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 UBXN2BQ14CS0 331 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 KBTBD12Q3ZCT8 623 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 FASTKD1Q53R41 847 aaKnown RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 AARS2Q5JTZ9 985 aaKnown RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 ESRP1Q6NXG1 681 aaKnown RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 AFTPHQ6ULP2 937 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ERN2Q76MJ5 926 aaKnown RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 SLC26A11Q86WA9 606 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 LMNTD2Q8IXW0 634 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 IL17RCQ8NAC3 791 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 OR4K2Q8NGD2 314 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 RPLP0P6Q8NHW5 317 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ERLEC1Q96DZ1 483 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 NSMCE3Q96MG7 304 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 ASB2Q96Q27 587 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 FAM129BQ96TA1 746 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 PAFAH2Q99487 392 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 TMEM109Q9BVC6 243 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 EPB41L4BQ9H329 900 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 POLMQ9NP87 494 aaPredicted RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 PCDH12Q9NPG4 1184 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 IARS2Q9NSE4 1012 aaKnown RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 NLE1Q9NVX2 485 aaPredicted RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 PKD2L2Q9NZM6 624 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 APPL1Q9UKG1 709 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SCML1Q9UN30 329 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 NCKAP1Q9Y2A7 1128 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 FNDC3AQ9Y2H6 1198 aaKnown RBP9.78□□□□□ -0.84
CCM2-204ENST00000470837 PPIL1Q9Y3C6 166 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SPO11Q9Y5K1 396 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SLC30A1Q9Y6M5 507 aa9.78□□□□□ -0.84
CCM2-204ENST00000470837 SZT2Q5T011 3432 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 ZCWPW2A0A1B0GU75 182 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 KANSL1LA0AUZ9 987 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 FAM159BA6NKW6 160 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 A8MX80 341 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 BUD23O43709 281 aaKnown RBP9.77□□□□□ -0.85
CCM2-204ENST00000470837 CLDN7O95471 211 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 ELFN1P0C7U0 828 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 TIMP2P16035 220 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 KRT15P19012 456 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CD72P21854 359 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 CNTFP26441 200 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 PTPN5P54829 565 aa9.77□□□□□ -0.85
CCM2-204ENST00000470837 SATB1Q01826 763 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms