RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 HSPA9P38646 679 aaKnown RBP17.55■□□□□ 0.4
COL7A1-208ENST00000470076 ARL4AP40617 200 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 SLC10A7Q0GE19 358 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 EIF3IQ13347 325 aaKnown RBP17.55■□□□□ 0.4
COL7A1-208ENST00000470076 DPYSL2Q16555 572 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 BOLA3Q53S33 107 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 NYAP1Q6ZVC0 841 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 CLEC14AQ86T13 490 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 GPR156Q8NFN8 814 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 SNRNP27Q8WVK2 155 aaKnown RBP17.55■□□□□ 0.4
COL7A1-208ENST00000470076 OR1E3Q8WZA6 343 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 TMEM63CQ9P1W3 806 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 RABGEF1Q9UJ41 708 aa17.55■□□□□ 0.4
COL7A1-208ENST00000470076 ZNF462Q96JM2 2506 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 A0A1B0GTH6 734 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 D6RAR5 112 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 PDE2AO00408 941 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-208ENST00000470076 SOCS5O75159 536 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 NFKBIAP25963 317 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 VAC14Q08AM6 782 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 ZNF235Q14590 738 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 ACOX1Q15067 660 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 ARHGAP40Q5TG30 622 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 OGFOD3Q6PK18 319 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 TAF8Q7Z7C8 310 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 WBP1Q96G27 269 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 STRADBQ9C0K7 418 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 ISCUQ9H1K1 167 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 WDR26Q9H7D7 661 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 FGF22Q9HCT0 170 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 KCTD5Q9NXV2 234 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 MYO1AQ9UBC5 1043 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 ARHGEF17Q96PE2 2063 aaPredicted RBP17.54■□□□□ 0.4
COL7A1-208ENST00000470076 AHCTF1Q8WYP5 2266 aa17.54■□□□□ 0.4
COL7A1-208ENST00000470076 A0A1W2PQM1 296 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 PMS2P1A4D2B8 440 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 CAPN8A6NHC0 703 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 PLD2O14939 933 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 HTRA2O43464 458 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-208ENST00000470076 RPLP0P05388 317 aaKnown RBP17.53■□□□□ 0.4
COL7A1-208ENST00000470076 PNLIPP16233 465 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 GLB1P16278 677 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 GM2AP17900 193 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 IL1R2P27930 398 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 ZNF165P49910 485 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 CCL7P80098 99 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 TSR1Q2NL82 804 aaKnown RBP17.53■□□□□ 0.4
COL7A1-208ENST00000470076 TAF1BQ53T94 588 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-208ENST00000470076 PNCKQ6P2M8 343 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 PCSK4Q6UW60 755 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 TMCO3Q6UWJ1 677 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 POLNQ7Z5Q5 900 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 TP53INP2Q8IXH6 220 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 BBS5Q8N3I7 341 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 FAM46DQ8NEK8 389 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 NSMCE3Q96MG7 304 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 TMEM74Q96NL1 305 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 NAP1L5Q96NT1 182 aaPredicted RBP17.53■□□□□ 0.4
COL7A1-208ENST00000470076 NUDCD1Q96RS6 583 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 LRRN3Q9H3W5 708 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 EPB41L5Q9HCM4 733 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 B4GALT6Q9UBX8 382 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 APPL1Q9UKG1 709 aa17.53■□□□□ 0.4
COL7A1-208ENST00000470076 COL6A6A6NMZ7 2263 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 A8MX80 341 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 PEX11BO96011 259 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 SKILP12757 684 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 CR2P20023 1033 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 AMPD1P23109 780 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 CCKBRP32239 447 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 INHBCP55103 352 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 PIGHQ14442 188 aaPredicted RBP17.52■□□□□ 0.4
COL7A1-208ENST00000470076 SMTNL2Q2TAL5 461 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 FIGNQ5HY92 759 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 RALGPS1Q5JS13 557 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 CERCAMQ5T4B2 595 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 RAB11FIP2Q7L804 512 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 B3GNT8Q7Z7M8 397 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 FBXO39Q8N4B4 442 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 COQ10AQ96MF6 247 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 CSPG4P5Q96PW8 444 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 LGR4Q9BXB1 951 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 TMEM168Q9H0V1 697 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 CYP4F12Q9HCS2 524 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 MRPL40Q9NQ50 206 aaKnown RBP17.52■□□□□ 0.4
COL7A1-208ENST00000470076 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.52■□□□□ 0.4
COL7A1-208ENST00000470076 PCDHGC4Q9Y5F7 938 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 PCDHGA7Q9Y5G6 932 aa17.52■□□□□ 0.4
COL7A1-208ENST00000470076 NOBOXO60393 691 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 MAFKO60675 156 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 CPP00450 1065 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 MYCLP1P12525 358 aaPredicted RBP17.51■□□□□ 0.39
COL7A1-208ENST00000470076 VIPR1P32241 457 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 SERPINB6P35237 376 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 UGT1A5P35504 534 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 CDH6P55285 790 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 CFHR1Q03591 330 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 NR1I3Q14994 352 aa17.51■□□□□ 0.39
COL7A1-208ENST00000470076 CNGA3Q16281 694 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms