RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 MAMLD1Q13495 774 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 MTM1Q13496 603 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 ACOX1Q15067 660 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 AMZ1Q400G9 498 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 CT47A1Q5JQC4 288 aaPredicted RBP12.31□□□□□ -0.44
HDAC3-204ENST00000469207 CERCAMQ5T4B2 595 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 DENND2CQ68D51 928 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 PNCKQ6P2M8 343 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 BRAT1Q6PJG6 821 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 USP53Q70EK8 1073 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 PRICKLE2Q7Z3G6 844 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 NPWQ8N729 165 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 PATE1Q8WXA2 126 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 ECHDC3Q96DC8 303 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 LMBRD1Q9NUN5 540 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 APPL1Q9UKG1 709 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 ST14Q9Y5Y6 855 aa12.31□□□□□ -0.44
HDAC3-204ENST00000469207 ANKRD62A6NC57 917 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ARHGAP42A6NI28 874 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 C9orf172C9J069 976 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 CACNB4O00305 520 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 NVLO15381 856 aaKnown RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 FGF10O15520 208 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 DAPK3O43293 454 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ELFN1P0C7U0 828 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 CCL4P13236 92 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 PSMA2P25787 234 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 AK4P27144 223 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SERPINA4P29622 427 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ALDH4A1P30038 563 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 TRIM23P36406 574 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 POLD2P49005 469 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 KIAA1024LP59773 190 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 KCNC4Q03721 635 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 BCL2L1Q07817 233 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SLC10A7Q0GE19 358 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 EIF3IQ13347 325 aaKnown RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ARHGEF7Q14155 803 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 HLTFQ14527 1009 aaKnown RBP eCLIP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 GRM3Q14832 879 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 C16orf72Q14CZ0 275 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 C14orf28Q4W4Y0 310 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 PPP6R3Q5H9R7 873 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ERMARDQ5T6L9 678 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 PHF19Q5T6S3 580 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 AFMIDQ63HM1 303 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SPECC1LQ69YQ0 1117 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ZNF574Q6ZN55 896 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 CYP4V2Q6ZWL3 525 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 APTXQ7Z2E3 356 aaKnown RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 IRF2BP2Q7Z5L9 587 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SPRED1Q7Z699 444 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 NRROSQ86YC3 692 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 PAF1Q8N7H5 531 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 RCBTB1Q8NDN9 531 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SGF29Q96ES7 293 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 TMEM74Q96NL1 305 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SMIM14Q96QK8 99 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 TUBGCP5Q96RT8 1024 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 CINPQ9BW66 212 aaPredicted RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 ATP13A3Q9H7F0 1226 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 B4GALT6Q9UBX8 382 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 LIMA1Q9UHB6 759 aaKnown RBP12.3□□□□□ -0.44
HDAC3-204ENST00000469207 PLEKHM1Q9Y4G2 1056 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 PCDHGC4Q9Y5F7 938 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 SCN8AQ9UQD0 1980 aa12.3□□□□□ -0.44
HDAC3-204ENST00000469207 TMX2-CTNND1H3BSU7 103 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 FGF1P05230 155 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 TPM2P07951 284 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 FAM87AP0C7U9 286 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 ITGB6P18564 788 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 TNFAIP3P21580 790 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 MPSTP25325 297 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 CSNK1DP48730 415 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 ARSDP51689 593 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 AIF1P55008 147 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 NKAIN2Q5VXU1 208 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 RFLNAQ6ZTI6 216 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 RFX8Q6ZV50 586 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 DPPA4Q7L190 304 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 SLITRK4Q8IW52 837 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 OR6C4Q8NGE1 309 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 ATL2Q8NHH9 583 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 PDCD6IPQ8WUM4 868 aaKnown RBP12.29□□□□□ -0.44
HDAC3-204ENST00000469207 HTR3CQ8WXA8 447 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 PMEPA1Q969W9 287 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 NUDT22Q9BRQ3 303 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 SYT11Q9BT88 431 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 HSD3B7Q9H2F3 369 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 CLMPQ9H6B4 373 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 CARS2Q9HA77 564 aaKnown RBP12.29□□□□□ -0.44
HDAC3-204ENST00000469207 SP110Q9HB58 689 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 ETNK2Q9NVF9 386 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 CWC15Q9P013 229 aaKnown RBP12.29□□□□□ -0.44
HDAC3-204ENST00000469207 BOD1L1Q8NFC6 3051 aa12.29□□□□□ -0.44
HDAC3-204ENST00000469207 AHCTF1Q8WYP5 2266 aa12.28□□□□□ -0.44
HDAC3-204ENST00000469207 ARHGEF17Q96PE2 2063 aaPredicted RBP12.28□□□□□ -0.44
HDAC3-204ENST00000469207 TRBV23OR9-2A0A075B6M9 112 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms