RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 ZNF711Q9Y462 761 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 ACTL7AQ9Y615 435 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 ARL5AQ9Y689 179 aa9.37□□□□□ -0.91
SMC1A-205ENST00000469129 GOLGA8CPA6NN73 597 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 H7C0S8 307 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PHGDHO43175 533 aaKnown RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 FZD6O60353 706 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 SNNO75324 88 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 GJB3O75712 270 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ARHGEF15O94989 841 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 SNUPNO95149 360 aaKnown RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 KLHL2O95198 593 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PGLSO95336 258 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PRAMEF12O95522 483 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ADH1CP00326 375 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PRLP01236 227 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 RALBP11234 206 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 CPA3P15088 417 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 MYOGP15173 224 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 SAT1P21673 171 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 GABRB3P28472 473 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PMLP29590 882 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 CD70P32970 193 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PPARGP37231 505 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ABCG1P45844 678 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 TTPAP49638 278 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 NUMBP49757 651 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ARSDP51689 593 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 STC1P52823 247 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 CORO7P57737 925 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 OCRLQ01968 901 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 FAM83EQ2M2I3 478 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PPM1JQ5JR12 505 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ATXN7L2Q5T6C5 722 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 AGAP9Q5VTM2 703 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 MBLAC2Q68D91 279 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 LRRC8EQ6NSJ5 796 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ZYG11AQ6WRX3 759 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 RNF135Q8IUD6 432 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 EFHBQ8N7U6 833 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 CCT6BQ92526 530 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 ZNF707Q96C28 371 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 CCDC126Q96EE4 140 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 CDKN2AIPNLQ96HQ2 116 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 SCYL1Q96KG9 808 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 TBATAQ96M53 351 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 MECRQ9BV79 373 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 TM6SF2Q9BZW4 377 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 STN1Q9H668 368 aaKnown RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 TLE6Q9H808 572 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 MAGEE1Q9HCI5 957 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 POLR3BQ9NW08 1133 aaPredicted RBP9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PLK2Q9NYY3 685 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 TMEM216Q9P0N5 145 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 SLC8A2Q9UPR5 921 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 PCDHGC4Q9Y5F7 938 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 SPO11Q9Y5K1 396 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 COMMD10Q9Y6G5 202 aa9.36□□□□□ -0.91
SMC1A-205ENST00000469129 LAMA2P24043 3122 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 CCDC162PA2VCL2 907 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 CAPN8A6NHC0 703 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 HTRA2O43464 458 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 HAUS5O94927 633 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 S1PR4O95977 384 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 TOP3BO95985 862 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 ASLP04424 464 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 PRKCGP05129 697 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 LTA4HP09960 611 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 PIRTP0C851 137 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 FGF3P11487 239 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 SRCP12931 536 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 TYRP14679 529 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 FDXRP22570 491 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 HLA-FP30511 346 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 NNMTP40261 264 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 RECQLP46063 649 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 HK2P52789 917 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 ARFIP2P53365 341 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 IRX4P78413 519 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 IRF9Q00978 393 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 DLG2Q15700 870 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 FUT11Q495W5 492 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 ZNF697Q5TEC3 545 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 HECTD2Q5U5R9 776 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 LIPMQ5VYY2 423 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 PPP2R2DQ66LE6 453 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 GPR153Q6NV75 609 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 C16orf46Q6P387 395 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 CNSTQ6PJW8 725 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 ARID3BQ8IVW6 561 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 WDR75Q8IWA0 830 aaKnown RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 KIRREL3Q8IZU9 778 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 STK40Q8N2I9 435 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 RYBPQ8N488 228 aaPredicted RBP9.35□□□□□ -0.91
SMC1A-205ENST00000469129 TTC30BQ8N4P2 665 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 MDGA1Q8NFP4 955 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 OR4K2Q8NGD2 314 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 OR13C4Q8NGS5 318 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 KCTD4Q8WVF5 259 aa9.35□□□□□ -0.91
SMC1A-205ENST00000469129 ING5Q8WYH8 240 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms