RNA–Protein interactions for RNA: ENST00000468214.1

PCOLCE-204, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 4

Gene PCOLCE, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-204ENST00000468214 HOMER3Q9NSC5 361 aa14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 RSPH14Q9UHP6 348 aa14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 ZNF148Q9UQR1 794 aa14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 CA5BQ9Y2D0 317 aa14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 PCDHGC4Q9Y5F7 938 aa14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 FADS3Q9Y5Q0 445 aa14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 ZNF106Q9H2Y7 1883 aaKnown RBP14.88□□□□□ -0.03
PCOLCE-204ENST00000468214 A0A1B0GTQ1 180 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 TSPAN11A1L157 253 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 F5H423 210 aaPredicted RBP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 YKT6O15498 198 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 PCDHGA12O60330 932 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 CBFA2T3O75081 653 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 TRIM16O95361 564 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 ITGAVP06756 1048 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 MMP2P08253 660 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 FTH1P19P0C7X4 201 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 SPINK2P20155 84 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 HNRNPA2B1P22626 353 aaKnown RBP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 CA4P22748 312 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 CD68P34810 354 aaPredicted RBP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 NXPH1P58417 271 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 RPS21P63220 83 aaKnown RBP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 LRRC73Q5JTD7 316 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 ANKRD20A2Q5SQ80 823 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 ANKRD20A1Q5TYW2 823 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 ANKRD20A3Q5VUR7 823 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 SEL1L3Q68CR1 1132 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 KIAA1161Q6NSJ0 714 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 BRAT1Q6PJG6 821 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 PRELID2Q8N945 189 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 CCDC110Q8TBZ0 833 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 HCAR2Q8TDS4 363 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 RAB7BQ96AH8 199 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 ECHDC3Q96DC8 303 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 KLHDC7BQ96G42 594 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 SPATA13Q96N96 652 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 RBM15Q96T37 977 aaKnown RBP eCLIP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 AP1M1Q9BXS5 423 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 GBA3Q9H227 469 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 ZFR2Q9UPR6 939 aaKnown RBP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 APOBEC2Q9Y235 224 aaKnown RBP14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 BTBD3Q9Y2F9 522 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 RAI2Q9Y5P3 530 aa14.87□□□□□ -0.03
PCOLCE-204ENST00000468214 GOLGA6L10A0A0M3HER8 536 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 TRAFD1O14545 582 aaPredicted RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 HTRA2O43464 458 aaPredicted RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 AP1G1O43747 822 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 HYAL3O43820 417 aaPredicted RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 TOP3BO95985 862 aaKnown RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 CPP00450 1065 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 ABL2P42684 1182 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 GDF10P55107 478 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 SKOR1P84550 965 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 IHHQ14623 411 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 SLC14A2Q15849 920 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 ARMC12Q5T9G4 340 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 DRICH1Q6PGQ1 229 aaPredicted RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 ARHGEF18Q6ZSZ5 1173 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 TTC7BQ86TV6 843 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 ZSWIM9Q86XI8 627 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 GATAD2AQ86YP4 633 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 TMEM145Q8NBT3 493 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 SPATA22Q8NHS9 363 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 SCNM1Q9BWG6 230 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 TDRD1Q9BXT4 1180 aaKnown RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 EPG5Q9HCE0 2579 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 TDRD6O60522 2096 aaKnown RBP14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 CACNA1BQ00975 2339 aa14.86□□□□□ -0.03
PCOLCE-204ENST00000468214 A0A1W2PQ67 120 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 C5orf60A6NFR6 353 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 GOLGA8CPA6NN73 597 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 TSPAN6O43657 245 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 PMPCBO75439 489 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 PGLSO95336 258 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 MT-CYBP00156 380 aaPredicted RBP14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 IFNB1P01574 187 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 THEGLP0DJG4 465 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 TIMP2P16035 220 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 PSMB4P28070 264 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 STIP1P31948 543 aaKnown RBP14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 SUOXP51687 545 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 POLR2LP62875 67 aaKnown RBP14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 SGCGQ13326 291 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 PCSK7Q16549 785 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 UGP2Q16851 508 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 TMEM259Q4ZIN3 620 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 DBX2Q6ZNG2 339 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 PTAR1Q7Z6K3 402 aaPredicted RBP14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 GLRX5Q86SX6 157 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 ZSCAN30Q86W11 494 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 SPATS2Q86XZ4 545 aaKnown RBP14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 CREG2Q8IUH2 290 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 PNPLA1Q8N8W4 532 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 CCDC89Q8N998 374 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 MAGOHBQ96A72 148 aaKnown RBP14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 RTP4Q96DX8 246 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 FCRL5Q96RD9 977 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 SLC17A9Q9BYT1 436 aa14.85□□□□□ -0.03
PCOLCE-204ENST00000468214 ERVMER34-1Q9H9K5 563 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms