RNA–Protein interactions for RNA: ENST00000467435.1

HDLBP-231, Transcript of high density lipoprotein binding protein, human

TSL 2

Gene HDLBP, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDLBP-231	ENST00000467435	PIH1D2	Q8WWB5	315 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	CDKN2AIPNL	Q96HQ2	116 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	ZFYVE19	Q96K21	471 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	TUBGCP5	Q96RT8	1024 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	EBF3	Q9H4W6	596 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	SUDS3	Q9H7L9	328 aa	Predicted RBP	12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	CATSPERZ	Q9NTU4	200 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	MARCH4	Q9P2E8	410 aa	Predicted RBP	12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	HECA	Q9UBI9	543 aa	Predicted RBP	12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	EMCN	Q9ULC0	261 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	ANKRD6	Q9Y2G4	727 aa		12.33	□□□□□ -0.44
HDLBP-231	ENST00000467435	STX7	O15400	261 aa	Known RBP	12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CD3EAP	O15446	510 aa	Known RBP	12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	PHGDH	O43175	533 aa	Known RBP	12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	HAUS5	O94927	633 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	C2	P06681	752 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	ALPI	P09923	528 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	NEFH	P12036	1026 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	BGN	P21810	368 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	PSMA3	P25788	255 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	GMPR	P36959	345 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CSRP3	P50461	194 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	RAB10	P61026	200 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	IRF9	Q00978	393 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	SEMA3A	Q14563	771 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	MYLK3	Q32MK0	819 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CARD16	Q5EG05	197 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	ZNF789	Q5FWF6	425 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	RBM20	Q5T481	1227 aa	Known RBP	12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	TMEM215	Q68D42	235 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	C16orf46	Q6P387	395 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CNST	Q6PJW8	725 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	FAM47E	Q6ZV65	393 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435		Q6ZVU0	165 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CLEC14A	Q86T13	490 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	LDB1	Q86U70	411 aa	Predicted RBP	12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	TRIM42	Q8IWZ5	723 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CACNA2D3	Q8IZS8	1091 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	GPR150	Q8NGU9	434 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	OR4L1	Q8NH43	312 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CYB5D2	Q8WUJ1	264 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	ZNF75CP	Q92670	426 aa	Predicted RBP	12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	SEC16B	Q96JE7	1060 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	TSNARE1	Q96NA8	513 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	NDN	Q99608	321 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	ZDHHC6	Q9H6R6	413 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	MANSC1	Q9H8J5	431 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	TRPV4	Q9HBA0	871 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	MAGEE1	Q9HCI5	957 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	FKBPL	Q9UIM3	349 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	FBXO10	Q9UK96	956 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435	CDH7	Q9ULB5	785 aa		12.32	□□□□□ -0.44
HDLBP-231	ENST00000467435		A0A0J9YYE9	177 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	CAPN8	A6NHC0	703 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	EBAG9	O00559	213 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	PLIN3	O60664	434 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	EDF1	O60869	148 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	TULP3	O75386	442 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	S1PR4	O95977	384 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	TRBC1	P01850	177 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	PROC	P04070	461 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	ASL	P04424	464 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	BPGM	P07738	259 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	CISD3	P0C7P0	127 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	SLC35E2B	P0CK96	405 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	BMP1	P13497	986 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	STMN1	P16949	149 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	HOXB8	P17481	243 aa	Predicted RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	SP100	P23497	879 aa	Predicted RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	RECQL	P46063	649 aa	Predicted RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	SLC12A2	P55011	1212 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	IRX4	P78413	519 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	POU4F1	Q01851	419 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	RAD51	Q06609	339 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	ILF2	Q12905	390 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	PDGFRL	Q15198	375 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	PTPRR	Q15256	657 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	DBN1	Q16643	649 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	TYSND1	Q2T9J0	566 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	CCDC153	Q494R4	210 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	FASTKD1	Q53R41	847 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	VIT	Q6UXI7	678 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	DPY19L3	Q6ZPD9	716 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	LYSMD3	Q7Z3D4	306 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	ETFBKMT	Q8IXQ9	262 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	PLD6	Q8N2A8	252 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	ST13P5	Q8NFI4	369 aa	Predicted RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	SORCS1	Q8WY21	1168 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	MYLIP	Q8WY64	445 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	TSPAN17	Q96FV3	270 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	MRGPRX3	Q96LB0	322 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	ELAC2	Q9BQ52	826 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	MECR	Q9BV79	373 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	PITPNM3	Q9BZ71	974 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	CPEB1	Q9BZB8	566 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	GPR63	Q9BZJ6	419 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	CIPC	Q9C0C6	399 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	ZFP14	Q9HCL3	533 aa		12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	THG1L	Q9NWX6	298 aa	Known RBP	12.31	□□□□□ -0.44
HDLBP-231	ENST00000467435	TMEM216	Q9P0N5	145 aa		12.31	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms