RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 MAN2A1Q16706 1144 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 SKIDA1Q1XH10 827 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 TAF3Q5VWG9 929 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 NAA35Q5VZE5 725 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 LIPIQ6XZB0 460 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 TAF8Q7Z7C8 310 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 PIM3Q86V86 326 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 DNAAF5Q86Y56 855 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 CAMK1DQ8IU85 385 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 PYROXD2Q8N2H3 581 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 EXOC2Q96KP1 924 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 TAAR9Q96RI9 348 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 TUBGCP5Q96RT8 1024 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 DDA1Q9BW61 102 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 NDST4Q9H3R1 872 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 CELSR2Q9HCU4 2923 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 MAN2B2Q9Y2E5 1009 aa12.24□□□□□ -0.45
UBR4-211ENST00000467272 FAM170AA1A519 330 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 PRAMEF11O60813 436 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 PRKCGP05129 697 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 PCCBP05166 539 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 CEACAM5P06731 702 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 THRAP10827 490 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 CCNB1P14635 433 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 UCHL3P15374 230 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 RFC1P35251 1148 aaPredicted RBP12.23□□□□□ -0.45
UBR4-211ENST00000467272 GPR3P46089 330 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 FMO1Q01740 532 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 TRA2AQ13595 282 aaKnown RBP eCLIP12.23□□□□□ -0.453e-7■■□□□ 14
UBR4-211ENST00000467272 IGFBP7Q16270 282 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 PHF19Q5T6S3 580 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 TMEM164Q5U3C3 297 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 ERAP2Q6P179 960 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 DPPA4Q7L190 304 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 ZNF677Q86XU0 584 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 RCBTB1Q8NDN9 531 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 OR4D9Q8NGE8 314 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 FAM172AQ8WUF8 416 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 SLC20A1Q8WUM9 679 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 PTCD2Q8WV60 388 aaKnown RBP12.23□□□□□ -0.45
UBR4-211ENST00000467272 SCARF2Q96GP6 870 aaPredicted RBP12.23□□□□□ -0.45
UBR4-211ENST00000467272 CCDC74BQ96LY2 380 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 COQ10AQ96MF6 247 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 TEX101Q9BY14 249 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 STK33Q9BYT3 514 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 KIAA1468Q9P260 1216 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 SEPT3Q9UH03 358 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 ANAPC2Q9UJX6 822 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 PILRAQ9UKJ1 303 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 B3GALT1Q9Y5Z6 326 aa12.23□□□□□ -0.45
UBR4-211ENST00000467272 ABCA12Q86UK0 2595 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 PRSS38A1L453 326 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 B4DGG1 531 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 B4E171 279 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 J3KR12 359 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 CACNB4O00305 520 aaPredicted RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 GADD45BO75293 160 aaPredicted RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 UNGP13051 313 aaPredicted RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 EPHB2P29323 1055 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 CSF2RBP32927 897 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 TSPAN7P41732 249 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 CD97P48960 835 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 MAZP56270 477 aaKnown RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 CDR2Q01850 454 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 ARHGEF7Q14155 803 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 CDO1Q16878 200 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 VWA3BQ502W6 1294 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 PNCKQ6P2M8 343 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 PTRH1Q86Y79 214 aaKnown RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 NAGSQ8N159 534 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 MSANTD4Q8NCY6 345 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 JPH3Q8WXH2 748 aaPredicted RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 SLC45A3Q96JT2 553 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 FRMD8Q9BZ67 464 aaPredicted RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 DPEP2Q9H4A9 486 aa12.22□□□□□ -0.45
UBR4-211ENST00000467272 TRNAU1APQ9NX07 287 aaKnown RBP12.22□□□□□ -0.45
UBR4-211ENST00000467272 IGHV1OR21-1A0A087WYE8 117 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 AGRPO00253 132 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 PPM1DO15297 605 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 ECEL1O95672 775 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 MYCLP1P12525 358 aaPredicted RBP12.21□□□□□ -0.45
UBR4-211ENST00000467272 PRKCSHP14314 528 aaPredicted RBP12.21□□□□□ -0.45
UBR4-211ENST00000467272 KELP23276 732 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 JAM2P57087 298 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 NSUN2Q08J23 767 aaKnown RBP eCLIP12.21□□□□□ -0.45
UBR4-211ENST00000467272 RAPGEF1Q13905 1077 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 MAP9Q49MG5 647 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 CRTC2Q53ET0 693 aaPredicted RBP12.21□□□□□ -0.45
UBR4-211ENST00000467272 PPP1R15BQ5SWA1 713 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 WDR59Q6PJI9 974 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 SLFN11Q7Z7L1 901 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 SRLQ86TD4 932 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 TSEN2Q8NCE0 465 aaKnown RBP12.21□□□□□ -0.45
UBR4-211ENST00000467272 KIAA1524Q8TCG1 905 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 CATSPER2Q96P56 530 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 PCDHB18PQ96TA0 734 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 GANQ9H2C0 597 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 PDCL3Q9H2J4 239 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 WDR26Q9H7D7 661 aa12.21□□□□□ -0.45
UBR4-211ENST00000467272 CYP4F12Q9HCS2 524 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms