RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 IRF3Q14653 427 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 RBMS2Q15434 407 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 TWIST1Q15672 202 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 NAB2Q15742 525 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 PCGF3Q3KNV8 242 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 DCAF12L2Q5VW00 463 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 ZNF626Q68DY1 528 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 LCTLQ6UWM7 567 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 DLK2Q6UY11 383 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 MON1BQ7L1V2 547 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 PRPF39Q86UA1 669 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 NOXA1Q86UR1 476 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 PALB2Q86YC2 1186 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 MB21D2Q8IYB1 491 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 C17orf53Q8N3J3 647 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 NANOGP1Q8N7R0 232 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 AGBL3Q8NEM8 1001 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 CRAMP1Q96RY5 1269 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 C1QTNF5Q9BXJ0 243 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 C1QTNF1Q9BXJ1 281 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 TKTL2Q9H0I9 626 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 SLITRK6Q9H5Y7 841 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 CATSPERBQ9H7T0 1116 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 SIRT3Q9NTG7 399 aaPredicted RBP4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 TRNAU1APQ9NX07 287 aaKnown RBP4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 IL36RNQ9UBH0 155 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 MORF4L1Q9UBU8 362 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 RPS6KA6Q9UK32 745 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 MAU2Q9Y6X3 613 aa4.49□□□□□ -1.69
CDC42BPA-211ENST00000466538 ZNF644Q9H582 1327 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 A0A1W2PQ09 198 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 SYNDIG1LA6NDD5 238 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 TMEM202A6NGA9 273 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 BTBD18B2RXH4 712 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 MS4A18H0YCH9 400 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 IFNL4K9M1U5 179 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 WNT9BO14905 357 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 HS6ST1O60243 411 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 JRKO75564 520 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 BEST1O76090 585 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 RB1P06400 928 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 CLTBP09497 229 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 CYP19A1P11511 503 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 AKR1B1P15121 316 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 GABRB1P18505 474 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 PIK3CAP42336 1068 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 SELENOVP59797 346 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 SORDQ00796 357 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 PMS2CLQ68D20 193 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 FBXO46Q6PJ61 603 aaPredicted RBP4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 SHC4Q6S5L8 630 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 SLC35F3Q8IY50 421 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 ZBTB2Q8N680 514 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 INPP5DQ92835 1189 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 OR2A14Q96R47 310 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 IFIH1Q9BYX4 1025 aaKnown RBP4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 FBXL17Q9UF56 701 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 PCDHGB4Q9UN71 923 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 FRMD4BQ9Y2L6 1034 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 RPS6KL1Q9Y6S9 549 aa4.48□□□□□ -1.69
CDC42BPA-211ENST00000466538 KRTAP4-8A0A0G2JLE6 195 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 IGLV5-39A0A0G2JS06 123 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 TMEM272A0A1B0GTI8 110 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 SRPRAP08240 638 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 FGF2P09038 288 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 PRF1P14222 555 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 SAT1P21673 171 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 GCH1P30793 250 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 NNMTP40261 264 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 EIF2DP41214 584 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 METAP2P50579 478 aaKnown RBP eCLIP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 GALCP54803 685 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 SNX16P57768 344 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 IFI35P80217 286 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 CALD1Q05682 793 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 LRMPQ12912 555 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 PTGR1Q14914 329 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 METTL2BQ6P1Q9 378 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 SEPT14Q6ZU15 432 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 HAPLN4Q86UW8 402 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 TMTC2Q8N394 836 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 DENND1AQ8TEH3 1009 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 NTN5Q8WTR8 489 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 ZKSCAN4Q969J2 545 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 RPL36ALQ969Q0 106 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 MOAP1Q96BY2 351 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 SAT2Q96F10 170 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 METTL2AQ96IZ6 378 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 SH3GL2Q99962 352 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 MMTAG2Q9BU76 263 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 POLDIP3Q9BY77 421 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 LTB4R2Q9NPC1 389 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 MKKSQ9NPJ1 570 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 DDX4Q9NQI0 724 aaKnown RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 GIMAP4Q9NUV9 329 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 OGFRQ9NZT2 677 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 UBA2Q9UBT2 640 aaPredicted RBP4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 NENFQ9UMX5 172 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 STON1Q9Y6Q2 735 aa4.47□□□□□ -1.69
CDC42BPA-211ENST00000466538 VWA5AO00534 786 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms