RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 TFF2Q03403 129 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 CDH17Q12864 832 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 SMAD4Q13485 552 aaKnown RBP18.71■□□□□ 0.59
CAPN3-209ENST00000466222 KBTBD12Q3ZCT8 623 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 SIRPB2Q5JXA9 342 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 SH2D5Q6ZV89 423 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 Q6ZVU0 165 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 PHTF2Q8N3S3 785 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 HLA-CQ95604 372 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 EBNA1BP2Q99848 306 aaKnown RBP18.71■□□□□ 0.59
CAPN3-209ENST00000466222 CHRAC1Q9NRG0 131 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 SLC17A7Q9P2U7 560 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 ERVW-1Q9UQF0 538 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 SLC27A6Q9Y2P4 619 aa18.71■□□□□ 0.59
CAPN3-209ENST00000466222 LOC285095A0A1B0GVY8 99 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 PIGNO95427 931 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 PRLP01236 227 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 LMNAP02545 664 aaKnown RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 CDK18Q07002 472 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 NSUN2Q08J23 767 aaKnown RBP eCLIP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 TRAF2Q12933 501 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 TAF1BQ53T94 588 aaPredicted RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 IER5LQ5T953 404 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 NCEH1Q6PIU2 408 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 UNC5AQ6ZN44 842 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 MTSS1LQ765P7 747 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 CLNKQ7Z7G1 428 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 CAMK1DQ8IU85 385 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 GPATCH11Q8N954 259 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 PDCD6IPQ8WUM4 868 aaKnown RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 ERLEC1Q96DZ1 483 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 KCNK12Q9HB15 430 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 PRDM6Q9NQX0 595 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 ELOVL2Q9NXB9 296 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 SLC25A13Q9UJS0 675 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 RAI2Q9Y5P3 530 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 SHROOM3Q8TF72 1996 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 A0A0U1RQS6 177 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 PSMD3O43242 534 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 SNRPAP09012 282 aaKnown RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 PRKCHP24723 683 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 DMC1Q14565 340 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 CRYMQ14894 314 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 HABP4Q5JVS0 413 aaKnown RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 FAM91A1Q658Y4 838 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 GRAMD4Q6IC98 578 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 TRMT10BQ6PF06 316 aaKnown RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 LINC00523Q86TU6 105 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 RYBPQ8N488 228 aaPredicted RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 ZNF557Q8N988 423 aaPredicted RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 MTBPQ96DY7 904 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 FCRL3Q96P31 734 aaPredicted RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 TRIB3Q96RU7 358 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 TBC1D10AQ9BXI6 508 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 IQCGQ9H095 443 aaKnown RBP18.7■□□□□ 0.58
CAPN3-209ENST00000466222 RNPEPL1Q9HAU8 725 aa18.7■□□□□ 0.58
CAPN3-209ENST00000466222 MYOFQ9NZM1 2061 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 HAUS5O94927 633 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 ARFIP2P53365 341 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 MSLNQ13421 630 aaPredicted RBP18.69■□□□□ 0.58
CAPN3-209ENST00000466222 ITPRIPL2Q3MIP1 535 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 C22orf39Q6P5X5 142 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 DPY19L3Q6ZPD9 716 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 LONP2Q86WA8 852 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 LRRC6Q86X45 466 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 CHST14Q8NCH0 376 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 IFT43Q96FT9 208 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 TDRD1Q9BXT4 1180 aaKnown RBP18.69■□□□□ 0.58
CAPN3-209ENST00000466222 BFARQ9NZS9 450 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 HCN2Q9UL51 889 aa18.69■□□□□ 0.58
CAPN3-209ENST00000466222 TBC1D3BA6NDS4 549 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 WASH3PC4AMC7 463 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 COPEO14579 308 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 DLDP09622 509 aaKnown RBP18.68■□□□□ 0.58
CAPN3-209ENST00000466222 CCNFP41002 786 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 CLNS1AP54105 237 aaKnown RBP18.68■□□□□ 0.58
CAPN3-209ENST00000466222 TXNDC11Q6PKC3 985 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 SLC44A3Q8N4M1 653 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 ENDOVQ8N8Q3 282 aaKnown RBP18.68■□□□□ 0.58
CAPN3-209ENST00000466222 FAM13CQ8NE31 585 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 OR2AP1Q8NGE2 309 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 FRS2Q8WU20 508 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 MFSD3Q96ES6 412 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 SERAC1Q96JX3 654 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 HECAQ9UBI9 543 aaPredicted RBP18.68■□□□□ 0.58
CAPN3-209ENST00000466222 DOCK8Q8NF50 2099 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 WDR91A4D1P6 747 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 GOLGA8RI6L899 631 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 CCDC22O60826 627 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 DIAPH2O60879 1101 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 C1QAP02745 245 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 CALB2P22676 271 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 SULT2A1Q06520 285 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 KRT72Q14CN4 511 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 ZNF449Q6P9G9 518 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 MTDHQ86UE4 582 aaKnown RBP18.68■□□□□ 0.58
CAPN3-209ENST00000466222 TERB1Q8NA31 727 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 OR2A12Q8NGT7 310 aa18.68■□□□□ 0.58
CAPN3-209ENST00000466222 PPP1R2P1Q96PQ5 205 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms