RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 IFT43Q96FT9 208 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 PBKQ96KB5 322 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 TMEM121Q9BTD3 319 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 GAREM1Q9H706 876 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 UBP1Q9NZI7 540 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 RSPH14Q9UHP6 348 aa14.56□□□□□ -0.08
SQSTM1-205ENST00000464493 CEP250Q9BV73 2442 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 POM121BA6NF01 834 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 C5orf60A6NFR6 353 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 NPIPB15A6NHN6 443 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 F5H423 210 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 LIASO43766 372 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 HEXIM1O94992 359 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CER1O95813 267 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 ATP1A1P05023 1023 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 THEGLP0DJG4 465 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 SDHBP21912 280 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 LHCGRP22888 699 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 ARHGEF7Q14155 803 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 GALNT3Q14435 633 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 LRRC14Q15048 493 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 ACOX1Q15067 660 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CNGA3Q16281 694 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 QPCTQ16769 361 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 LONRF2Q1L5Z9 754 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 RSPO4Q2I0M5 234 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CCDC70Q6NSX1 233 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CRTC1Q6UUV9 634 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 GCNT7Q6ZNI0 430 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 Q6ZSR6 202 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 TSPAN33Q86UF1 283 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CBARPQ8N350 705 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 TP53I13Q8NBR0 393 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 OR2I1PQ8NGU4 316 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CCDC110Q8TBZ0 833 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 SPATA13Q96N96 652 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 SMIM14Q96QK8 99 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 TRIB3Q96RU7 358 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 MLPHQ9BV36 600 aaPredicted RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 GBA3Q9H227 469 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 GDF3Q9NR23 364 aa14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CDV3Q9UKY7 258 aaKnown RBP14.55□□□□□ -0.08
SQSTM1-205ENST00000464493 CAPN8A6NHC0 703 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 A6NNZ2 444 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 PSMD11O00231 422 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 OPHN1O60890 802 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 GCATO75600 419 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 RECQL5O94762 991 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 STIP1P31948 543 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 TNNT3P45378 269 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 RABIFP47224 123 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 WNT3AP56704 352 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 NXPH1P58417 271 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 MPP3Q13368 585 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 SNX1Q13596 522 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 PRPSAP1Q14558 356 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 SIX1Q15475 284 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 OASLQ15646 514 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 CCNG2Q16589 344 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 WSCD2Q2TBF2 565 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 UAP1L1Q3KQV9 507 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 DENND2CQ68D51 928 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 KDELC1Q6UW63 502 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 KYAT3Q6YP21 454 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 DCP2Q8IU60 420 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 OR13H1Q8NG92 308 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 OXNAD1Q96HP4 312 aaPredicted RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 MRGPRX2Q96LB1 330 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 COQ10AQ96MF6 247 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 LYSMD1Q96S90 227 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 MBNL1Q9NR56 388 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 DNAAF2Q9NVR5 837 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 ZNF148Q9UQR1 794 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 ZKSCAN5Q9Y2L8 839 aa14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 AAR2Q9Y312 384 aaKnown RBP14.54□□□□□ -0.08
SQSTM1-205ENST00000464493 TMEM131Q92545 1883 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 A0A0U1RQS6 177 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 LOC285095A0A1B0GVY8 99 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 GOLGA8CPA6NN73 597 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 SLC30A4O14863 429 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 DFNA5O60443 496 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 ANXA9O76027 345 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 NDST3O95803 873 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 EPOP01588 193 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 ZNF30P17039 623 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 GM2AP17900 193 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 PSMB4P28070 264 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 IGFALSP35858 605 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 GEMP55040 296 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 GDF10P55107 478 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 PFN3P60673 137 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 GNG11P61952 73 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 PTSQ03393 145 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 IRF4Q15306 451 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 ZNF423Q2M1K9 1284 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 PRAMEF14Q5SWL7 426 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 LRRC66Q68CR7 880 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 ARHGEF18Q6ZSZ5 1173 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 HSD11B1LQ7Z5J1 315 aa14.53□□□□□ -0.08
SQSTM1-205ENST00000464493 PTAR1Q7Z6K3 402 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms