RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 CDH7Q9ULB5 785 aa14.6□□□□□ -0.07
COL5A1-205ENST00000464187 BPTFQ12830 3046 aa14.6□□□□□ -0.07
COL5A1-205ENST00000464187 TTC24A2A3L6 582 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CAPN14A8MX76 684 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 PMPCBO75439 489 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CD160O95971 181 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CALB2P22676 271 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 IGFBP4P22692 258 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 HLA-FP30511 346 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ARRB2P32121 409 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 DSC2Q02487 901 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 GRM3Q14832 879 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 PREPLQ4J6C6 727 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 TRIM68Q6AZZ1 485 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 RINLQ6ZS11 566 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ZC3HC1Q86WB0 502 aaKnown RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 PPHLN1Q8NEY8 458 aaKnown RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 EBF4Q9BQW3 602 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CINPQ9BW66 212 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CADM1Q9BY67 442 aaKnown RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 MRM3Q9HC36 420 aaKnown RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ABCB8Q9NUT2 735 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 TCAF1Q9Y4C2 921 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 TRIOBPQ9H2D6 2365 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 HEPACAM2A8MVW5 462 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CCDC22O60826 627 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 C2P06681 752 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 RALBP11234 206 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CPA3P15088 417 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 FCARP24071 287 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CCND1P24385 295 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 GRK2P25098 689 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ARNTP27540 789 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 LTBRP36941 435 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CD86P42081 329 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 MLLT1Q03111 559 aaPredicted RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 DHCR24Q15392 516 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 EML3Q32P44 896 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 PLEKHG6Q3KR16 790 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 WLSQ5T9L3 541 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 KDELC1Q6UW63 502 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 TREML1Q86YW5 311 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 CNTN4Q8IWV2 1026 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 OR6Y1Q8NGX8 325 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ARRDC2Q8TBH0 407 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 PIWIL2Q8TC59 973 aaKnown RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ACDQ96AP0 544 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 ASIC4Q96FT7 647 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 LMLNQ96KR4 655 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 SEMA3CQ99985 751 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 MGME1Q9BQP7 344 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 SIKE1Q9BRV8 207 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 BTBD10Q9BSF8 475 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 RHOJQ9H4E5 214 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 TRPV4Q9HBA0 871 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 MARK1Q9P0L2 795 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 INTS6Q9UL03 887 aaKnown RBP14.59□□□□□ -0.07
COL5A1-205ENST00000464187 L3MBTL1Q9Y468 752 aa14.59□□□□□ -0.07
COL5A1-205ENST00000464187 G3V2L1 256 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 GJB3O75712 270 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ATP5BP06576 529 aaKnown RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 MMP2P08253 660 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ESRRAP11474 423 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 POU3F3P20264 500 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 GABRB3P28472 473 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 CHRNA4P43681 627 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ARCN1P48444 511 aaKnown RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 TUBB3Q13509 450 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 SLC12A1Q13621 1099 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ITGA9Q13797 1035 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 CYTH1Q15438 398 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 INO80DQ53TQ3 878 aaPredicted RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ALG1LQ6GMV1 187 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 TANGO2Q6ICL3 276 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ESRP1Q6NXG1 681 aaKnown RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 MAVSQ7Z434 540 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 PTCD2Q8WV60 388 aaKnown RBP14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ZFYVE19Q96K21 471 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 RIPOR3Q96MK2 946 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 FAM161BQ96MY7 647 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 MYADMQ96S97 322 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 FSD1LQ9BXM9 530 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 ZFP14Q9HCL3 533 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 OBP2AQ9NY56 170 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 SLC2A6Q9UGQ3 507 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 SLC39A10Q9ULF5 831 aa14.58□□□□□ -0.08
COL5A1-205ENST00000464187 TMCC1O94876 653 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 MT-CO1P00395 513 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 CYP17A1P05093 508 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 HADHAP40939 763 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 RGRP47804 291 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 PLK1P53350 603 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 ABCE1P61221 599 aaKnown RBP14.57□□□□□ -0.08
COL5A1-205ENST00000464187 MPP1Q00013 466 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 IHHQ14623 411 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 PCSK7Q16549 785 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 PITRM1Q5JRX3 1037 aa14.57□□□□□ -0.08
COL5A1-205ENST00000464187 ASTLQ6HA08 431 aaPredicted RBP14.57□□□□□ -0.08
COL5A1-205ENST00000464187 RETSATQ6NUM9 610 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms