RNA–Protein interactions for RNA: ENST00000463916.5

XRN1-203, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene XRN1, Length 2,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-203ENST00000463916 CLDN6P56747 220 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 HNRNPKP61978 463 aaKnown RBP eCLIP13.01□□□□□ -0.33
XRN1-203ENST00000463916 ZNF211Q13398 564 aaPredicted RBP13.01□□□□□ -0.33
XRN1-203ENST00000463916 ARMC12Q5T9G4 340 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 OR4C6Q8NH72 309 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 SCRN2Q96FV2 425 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 COQ10AQ96MF6 247 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 IL12RB2Q99665 862 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 BAG1Q99933 345 aaPredicted RBP13.01□□□□□ -0.33
XRN1-203ENST00000463916 APOOQ9BUR5 198 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 CHKBQ9Y259 395 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 PPIL1Q9Y3C6 166 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 CFAP47Q6ZTR5 3102 aa13.01□□□□□ -0.33
XRN1-203ENST00000463916 KMT2BQ9UMN6 2715 aaPredicted RBP13□□□□□ -0.33
XRN1-203ENST00000463916 SCAMP1O15126 338 aa13□□□□□ -0.33
XRN1-203ENST00000463916 HEXIM1O94992 359 aaKnown RBP13□□□□□ -0.33
XRN1-203ENST00000463916 PECAM1P16284 738 aaPredicted RBP13□□□□□ -0.33
XRN1-203ENST00000463916 AP1B1Q10567 949 aa13□□□□□ -0.33
XRN1-203ENST00000463916 ACOX1Q15067 660 aa13□□□□□ -0.33
XRN1-203ENST00000463916 KAZNQ674X7 775 aa13□□□□□ -0.33
XRN1-203ENST00000463916 DENND2CQ68D51 928 aa13□□□□□ -0.33
XRN1-203ENST00000463916 C11orf63Q6NUN7 778 aa13□□□□□ -0.33
XRN1-203ENST00000463916 SPOCD1Q6ZMY3 1216 aa13□□□□□ -0.33
XRN1-203ENST00000463916 MACC1Q6ZN28 852 aa13□□□□□ -0.33
XRN1-203ENST00000463916 RFLNAQ6ZTI6 216 aa13□□□□□ -0.33
XRN1-203ENST00000463916 HSD11B1LQ7Z5J1 315 aa13□□□□□ -0.33
XRN1-203ENST00000463916 DAAM2Q86T65 1068 aa13□□□□□ -0.33
XRN1-203ENST00000463916 TSACCQ96A04 125 aaPredicted RBP13□□□□□ -0.33
XRN1-203ENST00000463916 MCCC1Q96RQ3 725 aaPredicted RBP13□□□□□ -0.33
XRN1-203ENST00000463916 AMACRQ9UHK6 382 aa13□□□□□ -0.33
XRN1-203ENST00000463916 LY6G6EA0A0G2JKS1 128 aa13□□□□□ -0.33
XRN1-203ENST00000463916 A0A1W2PQ67 120 aa13□□□□□ -0.33
XRN1-203ENST00000463916 FAM149AA5PLN7 773 aa13□□□□□ -0.33
XRN1-203ENST00000463916 CST8O60676 142 aa13□□□□□ -0.33
XRN1-203ENST00000463916 VIPR1P32241 457 aa13□□□□□ -0.33
XRN1-203ENST00000463916 HNF1BP35680 557 aa13□□□□□ -0.33
XRN1-203ENST00000463916 ETV3P41162 512 aa13□□□□□ -0.33
XRN1-203ENST00000463916 IFI35P80217 286 aaPredicted RBP13□□□□□ -0.33
XRN1-203ENST00000463916 C1orf61Q13536 156 aa13□□□□□ -0.33
XRN1-203ENST00000463916 PTK2BQ14289 1009 aa13□□□□□ -0.33
XRN1-203ENST00000463916 ODF2Q5BJF6 829 aa13□□□□□ -0.33
XRN1-203ENST00000463916 UNQ6494/PRO21346Q6UXR6 183 aa13□□□□□ -0.33
XRN1-203ENST00000463916 TMPRSS7Q7RTY8 843 aa13□□□□□ -0.33
XRN1-203ENST00000463916 KATNAL2Q8IYT4 538 aa13□□□□□ -0.33
XRN1-203ENST00000463916 ZNF830Q96NB3 372 aaPredicted RBP13□□□□□ -0.33
XRN1-203ENST00000463916 LGR4Q9BXB1 951 aa13□□□□□ -0.33
XRN1-203ENST00000463916 TDRD1Q9BXT4 1180 aaKnown RBP13□□□□□ -0.33
XRN1-203ENST00000463916 CLPBQ9H078 707 aa13□□□□□ -0.33
XRN1-203ENST00000463916 LUC7LQ9NQ29 371 aaKnown RBP13□□□□□ -0.33
XRN1-203ENST00000463916 U3KQA8 63 aa13□□□□□ -0.33
XRN1-203ENST00000463916 TMEM202A6NGA9 273 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 AQP9O43315 295 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 ZRANB2O95218 330 aaKnown RBP eCLIP12.99□□□□□ -0.33
XRN1-203ENST00000463916 CELA2BP08218 269 aaPredicted RBP12.99□□□□□ -0.33
XRN1-203ENST00000463916 ZFXP17010 805 aaPredicted RBP12.99□□□□□ -0.33
XRN1-203ENST00000463916 CKMT2P17540 419 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 CDC25BP30305 580 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 CD86P42081 329 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 PEX5P50542 639 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 PDK1Q15118 436 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 TCEA2Q15560 299 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 SMAD1Q15797 465 aaKnown RBP12.99□□□□□ -0.33
XRN1-203ENST00000463916 ALG11Q2TAA5 492 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 PRRT3Q5FWE3 981 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 CCNI2Q6ZMN8 369 aaPredicted RBP12.99□□□□□ -0.33
XRN1-203ENST00000463916 Q6ZVL8 140 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 PHACTR4Q8IZ21 702 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 LMX1AQ8TE12 382 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 AGAP3Q96P47 875 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 HERPUD2Q9BSE4 406 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 DESI2Q9BSY9 194 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 LRRC61Q9BV99 259 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 NLGN3Q9NZ94 848 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 TRIM10Q9UDY6 481 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 APOBEC3BQ9UH17 382 aaKnown RBP12.99□□□□□ -0.33
XRN1-203ENST00000463916 GOLGA4Q13439 2230 aaKnown RBP12.99□□□□□ -0.33
XRN1-203ENST00000463916 BPTFQ12830 3046 aa12.99□□□□□ -0.33
XRN1-203ENST00000463916 hCG_1818297A0A087WSY0 165 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 A0A0J9YYE9 177 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 TOR1BO14657 336 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 PJA2O43164 708 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 TRBC1P01850 177 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 CES1P23141 567 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 TRIM23P36406 574 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 VAV2P52735 878 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 SKOR1P84550 965 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 PTSQ03393 145 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 MTM1Q13496 603 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 NFATC4Q14934 902 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 DEFB133Q30KQ1 61 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 TFDP3Q5H9I0 405 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 FAXCQ5TGI0 409 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 PNCKQ6P2M8 343 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 CRTC1Q6UUV9 634 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 ENPP7Q6UWV6 458 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 RCOR2Q8IZ40 523 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 APOLD1Q96LR9 279 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 HEMGNQ9BXL5 484 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 SEPT10Q9P0V9 454 aa12.98□□□□□ -0.33
XRN1-203ENST00000463916 IMPACTQ9P2X3 320 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms