RNA–Protein interactions for RNA: ENST00000463479.1

PLOD3-210, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-210ENST00000463479 ZNF569Q5MCW4 686 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 RWDD4Q6NW29 188 aaKnown RBP13.04□□□□□ -0.32
PLOD3-210ENST00000463479 ZNF783Q6ZMS7 281 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 ARFGAP1Q8N6T3 406 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 DENND6BQ8NEG7 585 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 UBE2Q2Q8WVN8 375 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 ASB12Q8WXK4 309 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 GLMNQ92990 594 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 C1orf74Q96LT6 269 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 TRIM4Q9C037 500 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 CLPBQ9H078 707 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.04□□□□□ -0.32
PLOD3-210ENST00000463479 WDR70Q9NW82 654 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 GPATCH2LQ9NWQ4 482 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 ATXN7L1Q9ULK2 861 aaPredicted RBP13.04□□□□□ -0.32
PLOD3-210ENST00000463479 PADI4Q9UM07 663 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 ZKSCAN5Q9Y2L8 839 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 CAPN6Q9Y6Q1 641 aa13.04□□□□□ -0.32
PLOD3-210ENST00000463479 CCDC66A2RUB6 948 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 USP27XA6NNY8 438 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 MIF4GDA9UHW6 222 aaKnown RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 NTN3O00634 580 aaPredicted RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 YY2O15391 372 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 PSTPIP1O43586 416 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 FTCDO95954 541 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 CELA2BP08218 269 aaPredicted RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 RARAP10276 462 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 IL1R2P27930 398 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 ZNF135P52742 658 aaPredicted RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 CDH6P55285 790 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 TAS2R40P59535 323 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 TPI1P60174 286 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 SLC25A11Q02978 314 aaKnown RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 GNA12Q03113 381 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 PTK2BQ14289 1009 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 LINC00303Q3SY05 128 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 ZNF805Q5CZA5 627 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 LRRC38Q5VT99 294 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 POLNQ7Z5Q5 900 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 B3GNT8Q7Z7M8 397 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 CCDC50Q8IVM0 306 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 WDR48Q8TAF3 677 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 RAB7BQ96AH8 199 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 VOPP1Q96AW1 172 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 CENPTQ96BT3 561 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 TBC1D31Q96DN5 1066 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 LIN37Q96GY3 246 aaPredicted RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 TBATAQ96M53 351 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 PEBP4Q96S96 227 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 MAK16Q9BXY0 300 aaKnown RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 CATSPERBQ9H7T0 1116 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 EPB41L5Q9HCM4 733 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 DONSONQ9NYP3 566 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 HECAQ9UBI9 543 aaPredicted RBP13.03□□□□□ -0.32
PLOD3-210ENST00000463479 HECTD1Q9ULT8 2610 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 PIEZO2Q9H5I5 2752 aa13.03□□□□□ -0.32
PLOD3-210ENST00000463479 LRRD1A4D1F6 860 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 H3BRJ5 948 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 EEF2KO00418 725 aaKnown RBP13.02□□□□□ -0.33
PLOD3-210ENST00000463479 PLD2O14939 933 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 KRT1P04264 644 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 TCF4P15884 667 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 TSHRP16473 764 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 EPHB2P29323 1055 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 SLC5A2P31639 672 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 ACVRL1P37023 503 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 CSRP3P50461 194 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 RWDD2BP57060 319 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 GNG11P61952 73 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 SRSF6Q13247 344 aaKnown RBP13.02□□□□□ -0.33
PLOD3-210ENST00000463479 PDK2Q15119 407 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 RPS6KA1Q15418 735 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 TGIF1Q15583 401 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 LRRC73Q5JTD7 316 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 FAXCQ5TGI0 409 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 ESRP1Q6NXG1 681 aaKnown RBP13.02□□□□□ -0.33
PLOD3-210ENST00000463479 NT5DC3Q86UY8 548 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 CPNE8Q86YQ8 564 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 PLPP6Q8IY26 295 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 PYROXD2Q8N2H3 581 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 RYBPQ8N488 228 aaPredicted RBP13.02□□□□□ -0.33
PLOD3-210ENST00000463479 LRRC57Q8N9N7 239 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 ISG20Q96AZ6 181 aaKnown RBP13.02□□□□□ -0.33
PLOD3-210ENST00000463479 SLC13A1Q9BZW2 595 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 FAM117AQ9C073 453 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 ZYG11BQ9C0D3 744 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 GULP1Q9UBP9 304 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 RABGEF1Q9UJ41 708 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 PCDHGA7Q9Y5G6 932 aa13.02□□□□□ -0.33
PLOD3-210ENST00000463479 HEMK1Q9Y5R4 338 aaPredicted RBP13.02□□□□□ -0.33
PLOD3-210ENST00000463479 NAV2Q8IVL1 2488 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 KRIT1O00522 736 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 AREL1O15033 823 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 NOBOXO60393 691 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 LRIG2O94898 1065 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 ZRANB2O95218 330 aaKnown RBP eCLIP13.01□□□□□ -0.33
PLOD3-210ENST00000463479 UGT2B4P06133 528 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 HGFP14210 728 aa13.01□□□□□ -0.33
PLOD3-210ENST00000463479 HTR7P34969 479 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms