RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 LINC00303Q3SY05 128 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 C14orf28Q4W4Y0 310 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 PPP1R15BQ5SWA1 713 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 KCTD16Q68DU8 428 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 DCUN1D2Q6PH85 259 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 LIPIQ6XZB0 460 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 SPRED1Q7Z699 444 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 ERGIC2Q96RQ1 377 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 CMKLR1Q99788 373 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 SLC39A8Q9C0K1 460 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 LRIT1Q9P2V4 623 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 AHCTF1Q8WYP5 2266 aa19.87■□□□□ 0.77
VARS-221ENST00000463184 A0A1B0GTH6 734 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 EIF3CLB5ME19 914 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 NUDT21O43809 227 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 PRKCGP05129 697 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 ELFN1P0C7U0 828 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 PAPOLAP51003 745 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 BCL2L1Q07817 233 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 NSUN2Q08J23 767 aaKnown RBP eCLIP19.86■□□□□ 0.77
VARS-221ENST00000463184 RALGDSQ12967 914 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 HLTFQ14527 1009 aaKnown RBP eCLIP19.86■□□□□ 0.77
VARS-221ENST00000463184 AFMIDQ63HM1 303 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 TSEN2Q8NCE0 465 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 RNF214Q8ND24 703 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 NEK11Q8NG66 645 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 ECHDC3Q96DC8 303 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 CELF6Q96J87 481 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 EIF3CQ99613 913 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 AGPAT1Q99943 283 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 ARHGAP9Q9BRR9 750 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 FAM117AQ9C073 453 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 FGF22Q9HCT0 170 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 MRPL40Q9NQ50 206 aaKnown RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 HEMK1Q9Y5R4 338 aaPredicted RBP19.86■□□□□ 0.77
VARS-221ENST00000463184 RNF215Q9Y6U7 377 aa19.86■□□□□ 0.77
VARS-221ENST00000463184 TEX33O43247 280 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 KRT10P13645 584 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 ITIH1P19827 911 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 RGRP47804 291 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 NFATC3Q12968 1075 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 TSR1Q2NL82 804 aaKnown RBP19.85■□□□□ 0.77
VARS-221ENST00000463184 MANEAQ5SRI9 462 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 DPPA4Q7L190 304 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 PRICKLE2Q7Z3G6 844 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 PCMTD1Q96MG8 357 aaPredicted RBP19.85■□□□□ 0.77
VARS-221ENST00000463184 NAP1L5Q96NT1 182 aaPredicted RBP19.85■□□□□ 0.77
VARS-221ENST00000463184 CINPQ9BW66 212 aaPredicted RBP19.85■□□□□ 0.77
VARS-221ENST00000463184 B3GNT4Q9C0J1 378 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 TMEM168Q9H0V1 697 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 DPEP2Q9H4A9 486 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 PCDHB11Q9Y5F2 797 aa19.85■□□□□ 0.77
VARS-221ENST00000463184 PRAMEF33A0A0G2JMD5 474 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 B4DGG1 531 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 PYCARD-AS1I3L0S3 204 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 PDE2AO00408 941 aaPredicted RBP19.84■□□□□ 0.77
VARS-221ENST00000463184 EEF2KO00418 725 aaKnown RBP19.84■□□□□ 0.77
VARS-221ENST00000463184 PRAMEF10O60809 474 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 CD82P27701 267 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 UBASH3AP57075 661 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 SRSF6Q13247 344 aaKnown RBP19.84■□□□□ 0.77
VARS-221ENST00000463184 RFTN1Q14699 578 aaPredicted RBP19.84■□□□□ 0.77
VARS-221ENST00000463184 NR1I3Q14994 352 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 SPECC1LQ69YQ0 1117 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 ACAD10Q6JQN1 1059 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 PNCKQ6P2M8 343 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 SLITRK4Q8IW52 837 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 MCOLN2Q8IZK6 566 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 PAF1Q8N7H5 531 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 ZSCAN1Q8NBB4 408 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 KIAA1524Q8TCG1 905 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 USP7Q93009 1102 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 WDR26Q9H7D7 661 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 CYP4F12Q9HCS2 524 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 AKAP7Q9P0M2 348 aaPredicted RBP19.84■□□□□ 0.77
VARS-221ENST00000463184 AP4E1Q9UPM8 1137 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 SCN8AQ9UQD0 1980 aa19.84■□□□□ 0.77
VARS-221ENST00000463184 A0A1W2PQC6 194 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 TRAFD1O14545 582 aaPredicted RBP19.83■□□□□ 0.77
VARS-221ENST00000463184 SFTPCP11686 197 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 B4GALNT1Q00973 533 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 OGDHQ02218 1023 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 ERMARDQ5T6L9 678 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 SFTPA2Q8IWL1 248 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 CCL4L1Q8NHW4 92 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 EXTL1Q92935 676 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 LGR4Q9BXB1 951 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 STARD5Q9NSY2 213 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 GPATCH2LQ9NWQ4 482 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 MOSPD1Q9UJG1 213 aa19.83■□□□□ 0.77
VARS-221ENST00000463184 MYO18BQ8IUG5 2567 aa19.83■□□□□ 0.76
VARS-221ENST00000463184 PRSS38A1L453 326 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 ZW10O43264 779 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 DAPK3O43293 454 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 CCDC172P0C7W6 258 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 GM2AP17900 193 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 ETV5P41161 510 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 CSRP3P50461 194 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 SCNN1BP51168 640 aa19.82■□□□□ 0.76
VARS-221ENST00000463184 RENBPP51606 427 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms