RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 SERPING1P05155 500 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 HOXC4P09017 264 aaPredicted RBP22.85■■□□□ 1.25
PTPN4-207ENST00000460162 GM2AP17900 193 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 NFKBIAP25963 317 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 PDX1P52945 283 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 CDH6P55285 790 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 ZBED6P86452 979 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 RALGPS1Q5JS13 557 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 LUZP1Q86V48 1076 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 WDR26Q9H7D7 661 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 FGF22Q9HCT0 170 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 SIRPGQ9P1W8 387 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 RCOR3Q9P2K3 495 aaPredicted RBP22.85■■□□□ 1.25
PTPN4-207ENST00000460162 GULP1Q9UBP9 304 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 B4GALT6Q9UBX8 382 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 GPR34Q9UPC5 381 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 RAI2Q9Y5P3 530 aa22.85■■□□□ 1.25
PTPN4-207ENST00000460162 EIF4E1BA6NMX2 242 aaKnown RBP22.84■■□□□ 1.25
PTPN4-207ENST00000460162 NTN3O00634 580 aaPredicted RBP22.84■■□□□ 1.25
PTPN4-207ENST00000460162 TNFRSF10CO14798 259 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 CPP00450 1065 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 TRIM23P36406 574 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 MLLT3P42568 568 aaPredicted RBP22.84■■□□□ 1.25
PTPN4-207ENST00000460162 UBASH3AP57075 661 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 OR6C4Q8NGE1 309 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 NSMCE1Q8WV22 266 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 CCDC74AQ96AQ1 378 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 NUP85Q9BW27 656 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 SYNDIG1Q9H7V2 258 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 KCTD5Q9NXV2 234 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 CAPN11Q9UMQ6 739 aa22.84■■□□□ 1.25
PTPN4-207ENST00000460162 A0A1W2PNU3 283 aaPredicted RBP22.83■■□□□ 1.25
PTPN4-207ENST00000460162 TMEM202A6NGA9 273 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 CYP1A2P05177 515 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 RBMS1P29558 406 aaKnown RBP22.83■■□□□ 1.25
PTPN4-207ENST00000460162 VIPR1P32241 457 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 UCNP55089 124 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 ACOX1Q15067 660 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 TCEA2Q15560 299 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 CNGA3Q16281 694 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 KCTD16Q68DU8 428 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 TXNRD3NBQ6F5E7 133 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 NYAP1Q6ZVC0 841 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 GPR155Q7Z3F1 870 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 PGBD5Q8N414 524 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 WDR36Q8NI36 951 aaKnown RBP22.83■■□□□ 1.25
PTPN4-207ENST00000460162 KCNE4Q8WWG9 221 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 OR1E3Q8WZA6 343 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 NUS1Q96E22 293 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 COQ10AQ96MF6 247 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 PCDHGC4Q9Y5F7 938 aa22.83■■□□□ 1.25
PTPN4-207ENST00000460162 A0A087X0T9 212 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 CCDC187A0A096LP49 1063 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 TEX51A0A1B0GUA7 166 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 PDE2AO00408 941 aaPredicted RBP22.82■■□□□ 1.24
PTPN4-207ENST00000460162 FAM228BP0C875 321 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 MMP13P45452 471 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 KRT81Q14533 505 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 TSR1Q2NL82 804 aaKnown RBP22.82■■□□□ 1.24
PTPN4-207ENST00000460162 MARC1Q5VT66 337 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 BROXQ5VW32 411 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 LRRC49Q8IUZ0 686 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 GPR156Q8NFN8 814 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 PDCD6IPQ8WUM4 868 aaKnown RBP22.82■■□□□ 1.24
PTPN4-207ENST00000460162 LIN37Q96GY3 246 aaPredicted RBP22.82■■□□□ 1.24
PTPN4-207ENST00000460162 BTBD6Q96KE9 485 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 SLC46A1Q96NT5 459 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 NOD2Q9HC29 1040 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 PHTF1Q9UMS5 762 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 KIF26BQ2KJY2 2108 aa22.82■■□□□ 1.24
PTPN4-207ENST00000460162 TTC24A2A3L6 582 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 D6RAR5 112 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 GOLGA6L19H0YKK7 550 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 PSMD11O00231 422 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 ATXN7O15265 892 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 HEXIM1O94992 359 aaKnown RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 CYP2A6P11509 494 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 MYCLP1P12525 358 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 TMPRSS3P57727 454 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 TRAF2Q12933 501 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 PNCKQ6P2M8 343 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 ALKBH5Q6P6C2 394 aaKnown RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 FAM71BQ8TC56 605 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 PRR11Q96HE9 360 aaPredicted RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 NAF1Q96HR8 494 aaKnown RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 DPH1Q9BZG8 443 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 RABGEF1Q9UJ41 708 aa22.81■■□□□ 1.24
PTPN4-207ENST00000460162 LUC7L2Q9Y383 392 aaKnown RBP22.81■■□□□ 1.24
PTPN4-207ENST00000460162 PRSS38A1L453 326 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 A8MX80 341 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 TK2O00142 265 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 MYO1FO00160 1098 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 GYPCP04921 128 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 MAXP61244 160 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 CXADRP78310 365 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 SKOR1P84550 965 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 EIF3IQ13347 325 aaKnown RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 HADHQ16836 314 aaKnown RBP22.8■■□□□ 1.24
PTPN4-207ENST00000460162 TAF8Q7Z7C8 310 aa22.8■■□□□ 1.24
PTPN4-207ENST00000460162 ARL14Q8N4G2 192 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms