RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TAS2R40P59535 323 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 MAXP61244 160 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 MESDQ14696 234 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 RTP5Q14D33 572 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ACOX1Q15067 660 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ALG11Q2TAA5 492 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ATP13A4Q4VNC1 1196 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ALG1LQ6GMV1 187 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ESRP1Q6NXG1 681 aaKnown RBP17.92■□□□□ 0.46
MSH6-207ENST00000456246 ENPP7Q6UWV6 458 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 MARCH9Q86YJ5 346 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 IFI44Q8TCB0 444 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 SCRN2Q96FV2 425 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 NSMCE3Q96MG7 304 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 DEPDC7Q96QD5 511 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 CHP1Q99653 195 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 ABCG4Q9H172 646 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 WDR26Q9H7D7 661 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 NT5MQ9NPB1 228 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 DNPEPQ9ULA0 475 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 OR1A2Q9Y585 309 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 DGKBQ9Y6T7 804 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 U3KQA8 63 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 CFAP47Q6ZTR5 3102 aa17.92■□□□□ 0.46
MSH6-207ENST00000456246 TNFRSF10CO14798 259 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 GCATO75600 419 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 HEXIM1O94992 359 aaKnown RBP17.91■□□□□ 0.46
MSH6-207ENST00000456246 TSHRP16473 764 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 TRIM23P36406 574 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 SLC1A1P43005 524 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 SRP54P61011 504 aaKnown RBP17.91■□□□□ 0.46
MSH6-207ENST00000456246 SEMG2Q02383 582 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 TRAF2Q12933 501 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 TCEAL1Q15170 157 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 LRRC38Q5VT99 294 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 GKN2Q86XP6 184 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 HID1Q8IV36 788 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 WDR48Q8TAF3 677 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 MAPK15Q8TD08 544 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 HDAC11Q96DB2 347 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 COQ10AQ96MF6 247 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 MCCC1Q96RQ3 725 aaPredicted RBP17.91■□□□□ 0.46
MSH6-207ENST00000456246 SEMA3CQ99985 751 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 TCEAL2Q9H3H9 227 aaPredicted RBP17.91■□□□□ 0.46
MSH6-207ENST00000456246 SPTLC3Q9NUV7 552 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 PNMA8BQ9ULN7 279 aaPredicted RBP17.91■□□□□ 0.46
MSH6-207ENST00000456246 PPIL1Q9Y3C6 166 aa17.91■□□□□ 0.46
MSH6-207ENST00000456246 TTC24A2A3L6 582 aaPredicted RBP17.9■□□□□ 0.46
MSH6-207ENST00000456246 YY2O15391 372 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 TNFP01375 233 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 KDELR1P24390 212 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 CLDN6P56747 220 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 ITKQ08881 620 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 TBX2Q13207 712 aaPredicted RBP17.9■□□□□ 0.46
MSH6-207ENST00000456246 C1orf61Q13536 156 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 ARHGEF7Q14155 803 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 CNGA3Q16281 694 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 CDKN3Q16667 212 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 ODF2Q5BJF6 829 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 CDCP2Q5VXM1 449 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 OR56A4Q8NGH8 313 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.9■□□□□ 0.46
MSH6-207ENST00000456246 GRAMD1AQ96CP6 724 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 NUS1Q96E22 293 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 RNF157Q96PX1 679 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 TRIM5Q9C035 493 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 CAAP1Q9H8G2 361 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 RAI2Q9Y5P3 530 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 MYLKQ15746 1914 aa17.9■□□□□ 0.46
MSH6-207ENST00000456246 CPED1A4D0V7 1026 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 LRRD1A4D1F6 860 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 CCNB1P14635 433 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 ZFXP17010 805 aaPredicted RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 GM2AP17900 193 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 TEAD1P28347 426 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 RPL26P61254 145 aaKnown RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 GBE1Q04446 702 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 PNCKQ6P2M8 343 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 GUSBP11Q6P575 273 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 EFL1Q7Z2Z2 1120 aaKnown RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 CPNE8Q86YQ8 564 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 SLC35F3Q8IY50 421 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 PQLC3Q8N755 202 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 ARL10Q8N8L6 244 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 PLA2G15Q8NCC3 412 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 TSACCQ96A04 125 aaPredicted RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 FUBP1Q96AE4 644 aaKnown RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 DTD2Q96FN9 168 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 RBM15Q96T37 977 aaKnown RBP eCLIP17.89■□□□□ 0.458e-10■■□□□ 12.9
MSH6-207ENST00000456246 CLPBQ9H078 707 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 PHPT1Q9NRX4 125 aaPredicted RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 RBM22Q9NW64 420 aaKnown RBP eCLIP17.89■□□□□ 0.45
MSH6-207ENST00000456246 DTLQ9NZJ0 730 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 RPL26L1Q9UNX3 145 aaKnown RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 RAXQ9Y2V3 346 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 AK5Q9Y6K8 562 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 LRP4O75096 1905 aa17.89■□□□□ 0.45
MSH6-207ENST00000456246 URB1O60287 2271 aaKnown RBP17.89■□□□□ 0.45
MSH6-207ENST00000456246 A8MX80 341 aa17.88■□□□□ 0.45
MSH6-207ENST00000456246 FZD6O60353 706 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms