RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 NEPROQ6NW34 567 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 PRMT9Q6P2P2 845 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 FAM43BQ6ZT52 329 aaPredicted RBP10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 TICAM1Q8IUC6 712 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 SLC41A1Q8IVJ1 513 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 HOMEZQ8IX15 550 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 LSMEM2Q8N112 164 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 UMODL1-AS1Q8N2C9 162 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 IPMKQ8NFU5 416 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 ADAM32Q8TC27 787 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 FAM45AQ8TCE6 357 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 CCDC124Q96CT7 223 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 DCUN1D1Q96GG9 259 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 ELMO2Q96JJ3 720 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 ZFP42Q96MM3 310 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 TUBGCP5Q96RT8 1024 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 CYP2S1Q96SQ9 504 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 EFHD1Q9BUP0 239 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 SLC25A23Q9BV35 468 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 SPATA16Q9BXB7 569 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 FTHL17Q9BXU8 183 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 MRPS26Q9BYN8 205 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 RC3H2Q9HBD1 1191 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 SLC24A3Q9HC58 644 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 C8orf4Q9NR00 106 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 CPSF2Q9P2I0 782 aaKnown RBP10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 ZDHHC2Q9UIJ5 367 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 ST3GAL5Q9UNP4 418 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 FAM50BQ9Y247 325 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 SQORQ9Y6N5 450 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 TRIOO75962 3097 aa10.63□□□□□ -0.71
GTF3C2-206ENST00000454704 TTC3P53804 2025 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 ARL5CA6NH57 179 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 C5orf67F2Z3F1 127 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 DFFAO00273 331 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 SDHDO14521 159 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 PHGDHO43175 533 aaKnown RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 RNASEH1O60930 286 aaKnown RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 IPO13O94829 963 aaKnown RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 VAPBO95292 243 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 C8BP07358 591 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 RHOQP17081 205 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 GABRB3P28472 473 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 LTBRP36941 435 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 SLC1A2P43004 574 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 AQP4P55087 323 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 FOLH1Q04609 750 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 DLX2Q07687 328 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 MGAT3Q09327 533 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 CNGA3Q16281 694 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 USP41Q3LFD5 358 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 TCHHL1Q5QJ38 904 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 TSTD2Q5T7W7 516 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 NAIF1Q69YI7 327 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 KDELC1Q6UW63 502 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 UGT2A3Q6UWM9 527 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 RNF111Q6ZNA4 994 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 ADHFE1Q8IWW8 467 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 EDEM1Q92611 657 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 ROPN1LQ96C74 230 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 RCN3Q96D15 328 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 L3HYPDHQ96EM0 354 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 FUBP3Q96I24 572 aaKnown RBP eCLIP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 SUSD3Q96L08 255 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 CDRT15Q96T59 188 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 GAD1Q99259 594 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 OXCT2Q9BYC2 517 aaPredicted RBP10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 RHOBTB2Q9BYZ6 727 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 NUF2Q9BZD4 464 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 SLC39A8Q9C0K1 460 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 MFSD1Q9H3U5 465 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 POMKQ9H5K3 350 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 ZNF696Q9H7X3 374 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 MAN1C1Q9NR34 630 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 RIMS3Q9UJD0 308 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 KIAA1671Q9BY89 1806 aa10.62□□□□□ -0.71
GTF3C2-206ENST00000454704 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 KCNU1A8MYU2 1149 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 PAGE1O75459 146 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 HLA-DQB2P05538 268 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 CHRM1P11229 460 aaPredicted RBP10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 TPH1P17752 444 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 EPHA3P29320 983 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 BMPR1AP36894 532 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 RPL5P46777 297 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 SERPINH1P50454 418 aaKnown RBP10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 THOP1P52888 689 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 TAS2R39P59534 338 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 HYAL1Q12794 435 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 OLIG2Q13516 323 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 MAP7Q14244 749 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 PTK2BQ14289 1009 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 POU6F1Q14863 301 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 COQ5Q5HYK3 327 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 AP1ARQ63HQ0 302 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 LPCAT4Q643R3 524 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 NXNQ6DKJ4 435 aa10.61□□□□□ -0.71
GTF3C2-206ENST00000454704 ZNF470Q6ECI4 717 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms