RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 SEC16BQ96JE7 1060 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 LINC00615Q96LM1 132 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 RBM15Q96T37 977 aaKnown RBP eCLIP4.98□□□□□ -1.611e-7■□□□□ 11.1
RIF1-207ENST00000454583 GAS2L1Q99501 681 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 FRMD8Q9BZ67 464 aaPredicted RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 UGT1A7Q9HAW7 530 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 UGT1A10Q9HAW8 530 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 UGT1A8Q9HAW9 530 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 TRIM39Q9HCM9 518 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SLC2A6Q9UGQ3 507 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 SLCO3A1Q9UIG8 710 aa4.98□□□□□ -1.61
RIF1-207ENST00000454583 NOVA2Q9UNW9 492 aaKnown RBP4.98□□□□□ -1.61
RIF1-207ENST00000454583 H3BMH7 237 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 MTSS1O43312 755 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 TGDSO95455 350 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 S1PR4O95977 384 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 GSTA1P08263 222 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 DLDP09622 509 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 SKIV2L2P42285 1042 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 SOX9P48436 509 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 SLC11A2P49281 568 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 DNAJC3Q13217 504 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 GRB7Q14451 532 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 SHBQ15464 509 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 MYLK3Q32MK0 819 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 CCDC38Q502W7 563 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 RNF165Q6ZSG1 346 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 CROCCP2Q86T23 111 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 SPATS2Q86XZ4 545 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 RFX6Q8HWS3 928 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 ZNF547Q8IVP9 402 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 SYNPOQ8N3V7 929 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 MRPS31Q92665 395 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 SLC7A6OSQ96CW6 309 aaPredicted RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 IER2Q9BTL4 223 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 TEX101Q9BY14 249 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 EBF3Q9H4W6 596 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 ARHGEF3Q9NR81 526 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 MAGED2Q9UNF1 606 aaPredicted RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 A0A1W2PR77 199 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 PSMD11O00231 422 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 KCNN4O15554 427 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 EDF1O60869 148 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 KLHL18O94889 574 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 DKK1O94907 266 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 ASLP04424 464 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 SRGAP2BP0DMP2 458 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 TARSP26639 723 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 NMBRP28336 390 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 OR1E1P30953 314 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 GRIA2P42262 883 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 HARS2P49590 506 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 ZXDAP98168 799 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 OCRLQ01968 901 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 ZNF423Q2M1K9 1284 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 TPRG1LQ5T0D9 272 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 MBLAC2Q68D91 279 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 DARS2Q6PI48 645 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 GDPD4Q6W3E5 623 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 TRIM69Q86WT6 500 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 OXR1Q8N573 874 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 OR2AP1Q8NGE2 309 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 CFAP61Q8NHU2 1237 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 LPGAT1Q92604 370 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 HLA-CQ95604 372 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 SORT1Q99523 831 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 MFSD1Q9H3U5 465 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 IGSF5Q9NSI5 407 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 COPG2Q9UBF2 871 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 PLA2G4CQ9UP65 541 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 FCF1Q9Y324 198 aaKnown RBP4.97□□□□□ -1.61
RIF1-207ENST00000454583 FADS3Q9Y5Q0 445 aa4.97□□□□□ -1.61
RIF1-207ENST00000454583 A0A087WUV0 522 aaPredicted RBP4.96□□□□□ -1.61
RIF1-207ENST00000454583 LY6G6EA0A0G2JKS1 128 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 ANKRD66B4E2M5 251 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 KCNK1O00180 336 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 RAMP2O60895 175 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 CDH16O75309 829 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 APOEP02649 317 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 IVLP07476 585 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 FDXRP22570 491 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 SP100P23497 879 aaPredicted RBP4.96□□□□□ -1.61
RIF1-207ENST00000454583 SERPINB6P35237 376 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 PTPN5P54829 565 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 AP1S1P61966 158 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 ECT2LQ008S8 904 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 SNX1Q13596 522 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 CRYMQ14894 314 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 ZNF284Q2VY69 593 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 MAP7D1Q3KQU3 841 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.61
RIF1-207ENST00000454583 DPY19L3Q6ZPD9 716 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 ARHGEF18Q6ZSZ5 1173 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 TFAP2DQ7Z6R9 452 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 PACS2Q86VP3 889 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 MAP7D3Q8IWC1 876 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 PARP9Q8IXQ6 854 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 LRRC34Q8IZ02 419 aa4.96□□□□□ -1.61
RIF1-207ENST00000454583 CENPLQ8N0S6 344 aaPredicted RBP4.96□□□□□ -1.61
RIF1-207ENST00000454583 PJA1Q8NG27 643 aa4.96□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms