RNA–Protein interactions for RNA: ENST00000453580.1

TNFRSF4-202, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 3

Gene TNFRSF4, Length 393 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-202ENST00000453580 ABCG1P45844 678 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 ITKQ08881 620 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 RALGDSQ12967 914 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 C1orf61Q13536 156 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 ALG11Q2TAA5 492 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 RBM44Q6ZP01 1051 aaKnown RBP17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 RD3Q7Z3Z2 195 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 RHOT2Q8IXI1 618 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 RAVER1Q8IY67 606 aaKnown RBP17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 OR56A4Q8NGH8 313 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 SNIP1Q8TAD8 396 aaKnown RBP17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 NUS1Q96E22 293 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 SCRN2Q96FV2 425 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 CCDC42Q96M95 316 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 PHPT1Q9NRX4 125 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 ETNK2Q9NVF9 386 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 B4GALT6Q9UBX8 382 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 NENFQ9UMX5 172 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 OR1A2Q9Y585 309 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 U3KQA8 63 aa17.13■□□□□ 0.33
TNFRSF4-202ENST00000453580 ZNF487B1APH4 448 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 MATN3O15232 486 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 ZW10O43264 779 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 PEX11BO96011 259 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 TEAD1P28347 426 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 LSSP48449 732 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 GALNT2Q10471 571 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 DPYSL3Q14195 570 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 ODF2Q5BJF6 829 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 ANKRD20A8PQ5CZ79 823 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 TXNRD3NBQ6F5E7 133 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 PNCKQ6P2M8 343 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 GUSBP11Q6P575 273 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 VSIG1Q86XK7 387 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 CNGA4Q8IV77 575 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 TEX26Q8N6G2 289 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 TSACCQ96A04 125 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 TSGA13Q96PP4 275 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 TCEAL2Q9H3H9 227 aaPredicted RBP17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 POLR1BQ9H9Y6 1135 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 NOD2Q9HC29 1040 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 GPR34Q9UPC5 381 aa17.12■□□□□ 0.33
TNFRSF4-202ENST00000453580 LRP4O75096 1905 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 CHD6Q8TD26 2715 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 BRINP1O60477 761 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 USP12O75317 370 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 DXOO77932 396 aaKnown RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 HEXIM1O94992 359 aaKnown RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 PGLSO95336 258 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 PRKCGP05129 697 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 MYCLP1P12525 358 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 ZNF30P17039 623 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 IL4RP24394 825 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 GJC1P36383 396 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 EIF2S3P41091 472 aaKnown RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 MLLT3P42568 568 aaPredicted RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 EPHB1P54762 984 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 CLDN6P56747 220 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 ERVPABLB-1P60509 514 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 RPL26P61254 145 aaKnown RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 SPIDRQ14159 915 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 ISXQ2M1V0 245 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 COL28A1Q2UY09 1125 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 TBC1D25Q3MII6 688 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 C19orf48Q6RUI8 117 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 TP53INP2Q8IXH6 220 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 SLC35F3Q8IY50 421 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 COQ10AQ96MF6 247 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 CLPBQ9H078 707 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 NT5MQ9NPB1 228 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 GULP1Q9UBP9 304 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 RPL26L1Q9UNX3 145 aaKnown RBP17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 PPIL1Q9Y3C6 166 aa17.11■□□□□ 0.33
TNFRSF4-202ENST00000453580 ARSEP51690 589 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 PCBP4P57723 403 aaKnown RBP17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 NCBP2-AS2Q69YL0 99 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 ALG1LQ6GMV1 187 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 IGF2-ASQ6U949 168 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 TAF8Q7Z7C8 310 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 PDZD3Q86UT5 571 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 PGBD5Q8N414 524 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 ZNF248Q8NDW4 579 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 PCDH19Q8TAB3 1148 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 KIAA1524Q8TCG1 905 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 MAML1Q92585 1016 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 FUBP1Q96AE4 644 aaKnown RBP17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 FAF2Q96CS3 445 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 MCCC1Q96RQ3 725 aaPredicted RBP17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 SEMA3CQ99985 751 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 MAK16Q9BXY0 300 aaKnown RBP17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 THSD1Q9NS62 852 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 ABHD10Q9NUJ1 306 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 INTUQ9ULD6 942 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 RAI2Q9Y5P3 530 aa17.1■□□□□ 0.33
TNFRSF4-202ENST00000453580 ASXL3Q9C0F0 2248 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms