RNA–Protein interactions for RNA: ENST00000452182.1

SCN9A-204, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,618 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-204ENST00000452182 SLC25A41Q8N5S1 370 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 ZBTB44Q8NCP5 570 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 LRRN4CLQ8ND94 238 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 OR52K1Q8NGK4 314 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 RLN3Q8WXF3 142 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 TOE1Q96GM8 510 aaKnown RBP11.61□□□□□ -0.55
SCN9A-204ENST00000452182 C19orf43Q9BQ61 176 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 APOL2Q9BQE5 337 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 FAM129AQ9BZQ8 928 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 TRIM31Q9BZY9 425 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 GRHL1Q9NZI5 618 aa11.61□□□□□ -0.55
SCN9A-204ENST00000452182 DMGDHQ9UI17 866 aaKnown RBP11.61□□□□□ -0.55
SCN9A-204ENST00000452182 CTPS1P17812 591 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LHCGRP22888 699 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 HMGCLP35914 325 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 MAGEA3P43357 314 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 NPY2RP49146 381 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ITGA8P53708 1063 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 GUCY2DQ02846 1103 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CREB5Q02930 508 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CAV1Q03135 178 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LRRC73Q5JTD7 316 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 SPDYCQ5MJ68 293 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CRTC1Q6UUV9 634 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CAND1Q86VP6 1230 aaKnown RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TRIM69Q86WT6 500 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 DNAAF3Q8N9W5 541 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CADM4Q8NFZ8 388 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 BRSK1Q8TDC3 778 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 GAB3Q8WWW8 586 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 SERPINB12Q96P63 405 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 DPH5Q9H2P9 285 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 RRAGDQ9NQL2 400 aaPredicted RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ANAPC5Q9UJX4 755 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 PCDHGA2Q9Y5H1 932 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LRRK1Q38SD2 2015 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 FANCMQ8IYD8 2048 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3DA0A087WVF3 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3IA0A087WXS9 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3EA0A087X179 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3KA0A087X1G2 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3FA6NER0 549 aaPredicted RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3LB9A6J9 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 NEMP1O14524 444 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LATO43561 262 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LILRB5O75023 590 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 RPP40O75818 363 aaKnown RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 PCDH8O95206 1070 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 PRKCGP05129 697 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3HP0C7X1 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CCR5P51681 352 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 RPS21P63220 83 aaKnown RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 PDE1BQ01064 536 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 PTSQ03393 145 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LAMB3Q13751 1172 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ARHGEF7Q14155 803 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 AGERQ15109 404 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CNGA3Q16281 694 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TMEM259Q4ZIN3 620 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LRRC66Q68CR7 880 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3GQ6DHY5 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3CQ6IPX1 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 LIPIQ6XZB0 460 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TMC3Q7Z5M5 1100 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 HORMAD1Q86X24 394 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 TBC1D3Q8IZP1 549 aaPredicted RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 FAM160A2Q8N612 972 aaPredicted RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 FRMD1Q8N878 549 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 CXorf40AQ8TE69 158 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ASB12Q8WXK4 309 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ART4Q93070 314 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 SMIM14Q96QK8 99 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 RANBP9Q96S59 729 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 IL22Q9GZX6 179 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ZFYVE1Q9HBF4 777 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 EPB41L5Q9HCM4 733 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 FAM114A2Q9NRY5 505 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 KCTD5Q9NXV2 234 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 BFARQ9NZS9 450 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 MBD1Q9UIS9 605 aaPredicted RBP11.6□□□□□ -0.55
SCN9A-204ENST00000452182 GGT7Q9UJ14 662 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ITM2BQ9Y287 266 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 ZNF711Q9Y462 761 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 SPO11Q9Y5K1 396 aa11.6□□□□□ -0.55
SCN9A-204ENST00000452182 WDFY4Q6ZS81 3184 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 NUMA1Q14980 2115 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 SCN8AQ9UQD0 1980 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 MYLKQ15746 1914 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 CEP192Q8TEP8 1941 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 C1orf232A0A0U1RR37 186 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 RGSL1A5PLK6 1076 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 RNGTTO60942 597 aaKnown RBP11.59□□□□□ -0.55
SCN9A-204ENST00000452182 NDUFS2O75306 463 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 PPFIA2O75334 1257 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 CRTAMO95727 393 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 ELFN1P0C7U0 828 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 PIRTP0C851 137 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 NUDT1P36639 197 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 LIG3P49916 1009 aa11.59□□□□□ -0.55
SCN9A-204ENST00000452182 STC1P52823 247 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms