RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TSPAN33Q86UF1 283 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 C11orf74Q86VG3 221 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 TRIM69Q86WT6 500 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 SCRN2Q96FV2 425 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 ZC3H10Q96K80 434 aaKnown RBP13.08□□□□□ -0.32
VPS33A-202ENST00000451053 HSPA12BQ96MM6 686 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 TBL1YQ9BQ87 522 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 ADGRE3Q9BY15 652 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 TRIM31Q9BZY9 425 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 EPC1Q9H2F5 836 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 DPH5Q9H2P9 285 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 GOLGA6AQ9NYA3 693 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 RAB21Q9UL25 225 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 SNX24Q9Y343 169 aa13.08□□□□□ -0.32
VPS33A-202ENST00000451053 METTL12A8MUP2 240 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 ANKRD66B4E2M5 251 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 DNALI1O14645 258 aaPredicted RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 ERLIN1O75477 346 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 AP2A1O95782 977 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 EPOP01588 193 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 PIRTP0C851 137 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 CYP2A6P11509 494 aaPredicted RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 LHCGRP22888 699 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 MAT2AP31153 395 aaKnown RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 VIPR1P32241 457 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 RPL21P46778 160 aaKnown RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 DHPSP49366 369 aaPredicted RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 CCR5P51681 352 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 BASP1P80723 227 aaKnown RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 HLTFQ14527 1009 aaKnown RBP eCLIP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 MORF4L2Q15014 288 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 MAP9Q49MG5 647 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 TMEM259Q4ZIN3 620 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 NEK5Q6P3R8 708 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 RANBP10Q6VN20 620 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 CEP128Q6ZU80 1094 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 HOOK3Q86VS8 718 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 HORMAD1Q86X24 394 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 CADM4Q8NFZ8 388 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 SNX19Q92543 992 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 KLK6Q92876 244 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 BIRC7Q96CA5 298 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 PARD6BQ9BYG5 372 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 TSPYL1Q9H0U9 437 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 IRF2BPLQ9H1B7 796 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 PCED1AQ9H1Q7 454 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 LRRC40Q9H9A6 602 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 EBF2Q9HAK2 575 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 ARGLU1Q9NWB6 273 aaPredicted RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 MTRF1LQ9UGC7 380 aaKnown RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 TPX2Q9ULW0 747 aaKnown RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 SHOC2Q9UQ13 582 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.07□□□□□ -0.32
VPS33A-202ENST00000451053 COQ6Q9Y2Z9 468 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 SPO11Q9Y5K1 396 aa13.07□□□□□ -0.32
VPS33A-202ENST00000451053 ABCA7Q8IZY2 2146 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 IGLON5A6NGN9 336 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 MEI4A8MW99 385 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 E7EVH7 732 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 PSMD3O43242 534 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 RHOBTB1O94844 696 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 SEC31AO94979 1220 aaKnown RBP13.06□□□□□ -0.32
VPS33A-202ENST00000451053 FGF1P05230 155 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 APRTP07741 180 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 C6P13671 934 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 GM2AP17900 193 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 HLA-DPA1P20036 260 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 TNNT3P45378 269 aaPredicted RBP13.06□□□□□ -0.32
VPS33A-202ENST00000451053 LMAN1P49257 510 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 LIG3P49916 1009 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 RPS21P63220 83 aaKnown RBP13.06□□□□□ -0.32
VPS33A-202ENST00000451053 FGL2Q14314 439 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 NAA30Q147X3 362 aaPredicted RBP13.06□□□□□ -0.32
VPS33A-202ENST00000451053 BRD3Q15059 726 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 CNGA3Q16281 694 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 CDKN3Q16667 212 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 ZNF284Q2VY69 593 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 KIAA1161Q6NSJ0 714 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 CRTC1Q6UUV9 634 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 LIPIQ6XZB0 460 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 PPP1R21Q6ZMI0 780 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 PPIL6Q8IXY8 311 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 CXorf40AQ8TE69 158 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 IFT81Q8WYA0 676 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 FOXJ1Q92949 421 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 ORAI3Q9BRQ5 295 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 FRMD8Q9BZ67 464 aaPredicted RBP13.06□□□□□ -0.32
VPS33A-202ENST00000451053 FOXP3Q9BZS1 431 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 ANAPC5Q9UJX4 755 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 SMG5Q9UPR3 1016 aaKnown RBP13.06□□□□□ -0.32
VPS33A-202ENST00000451053 SLCO1B1Q9Y6L6 691 aa13.06□□□□□ -0.32
VPS33A-202ENST00000451053 CEP192Q8TEP8 1941 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 THADAQ6YHU6 1953 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 TCRBV7S3A2A0A539 114 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 CCDC151A5D8V7 595 aa13.05□□□□□ -0.32
VPS33A-202ENST00000451053 GOLGA8CPA6NN73 597 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms