RNA–Protein interactions for RNA: ENST00000450649.6

SCUBE2-202, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene SCUBE2, Length 2,912 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-202ENST00000450649 BROXQ5VW32 411 aa17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 PIWIL3Q7Z3Z3 882 aaKnown RBP17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 CUZD1Q86UP6 607 aa17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 FAM35AQ86V20 835 aa17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 MFSD6LQ8IWD5 586 aa17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 RCOR3Q9P2K3 495 aaPredicted RBP17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 ABCD2Q9UBJ2 740 aa17.23■□□□□ 0.35
SCUBE2-202ENST00000450649 ZBTB24O43167 697 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 STMN1P16949 149 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 RCVRNP35243 200 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 PCYT1AP49585 367 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 YBX1P67809 324 aaKnown RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 OCA2Q04671 838 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 CYP51A1Q16850 503 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 KCTD11Q693B1 232 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 HEXDCQ8WVB3 486 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 RPL10LQ96L21 214 aaKnown RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 MUS81Q96NY9 551 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 MRPL57Q9BQC6 102 aaKnown RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 MLPHQ9BV36 600 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 NSMCE4AQ9NXX6 385 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 A0A087WZ62 844 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 TTC24A2A3L6 582 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 NR5A2O00482 541 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 ARPC2O15144 300 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 LCP1P13796 627 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 GFAPP14136 432 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 ARF4P18085 180 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 NR4A1P22736 598 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 DNAJB1P25685 340 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 AXLP30530 894 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 RFC2P35250 354 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 NPY2RP49146 381 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 PLA2G16P53816 162 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 CAPRIN1Q14444 709 aaKnown RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 APOBEC3FQ8IUX4 373 aaKnown RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 DENND6AQ8IWF6 608 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 LPIN3Q9BQK8 851 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 FDXACB1Q9BRP7 624 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 PDGFDQ9GZP0 370 aaPredicted RBP17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 HMG20AQ9NP66 347 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 VWA7Q9Y334 891 aa17.22■□□□□ 0.35
SCUBE2-202ENST00000450649 FAM95CA0A1B0GW59 222 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 INPP4BO15327 924 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 FCGR1AP12314 374 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 HSD17B1P14061 328 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 CYP2B6P20813 491 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 KCNA5P22460 613 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 STX1BP61266 288 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 BNIP2Q12982 314 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 CTBP1Q13363 440 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 AQP6Q13520 282 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 AGAP7PQ5VUJ5 663 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 SPNS2Q8IVW8 549 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 GOLM1Q8NBJ4 401 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 HOPXQ9BPY8 73 aaPredicted RBP17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 MRPL45Q9BRJ2 306 aaKnown RBP17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 SETD4Q9NVD3 440 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 CMTM6Q9NX76 183 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 DNMT3BQ9UBC3 853 aaKnown RBP17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 MTHFD1P11586 935 aaKnown RBP17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 SCNN1AP37088 669 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 IFITM3Q01628 133 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 NSMCE3Q96MG7 304 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 TRIM8Q9BZR9 551 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 EML4Q9HC35 981 aaKnown RBP17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 UBP1Q9NZI7 540 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 WARS2Q9UGM6 360 aaKnown RBP17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 SUN2Q9UH99 717 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 POU2F3Q9UKI9 436 aa17.21■□□□□ 0.35
SCUBE2-202ENST00000450649 ABCB7O75027 752 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 MT-ND1P03886 318 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 GPX3P22352 226 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 CD68P34810 354 aaPredicted RBP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 ARCN1P48444 511 aaKnown RBP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 PGS1Q32NB8 556 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 ZIK1Q3SY52 487 aaPredicted RBP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 VPS26BQ4G0F5 336 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 CLEC6AQ6EIG7 209 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 TBPL2Q6SJ96 375 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 SIAEQ9HAT2 523 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 PIM2Q9P1W9 311 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 A0A0G2JMZ2 1700 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 LRRC37A2A6NM11 1700 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 SYNJ2BP-COX16A0A087WUM0 186 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 A0A0J9YYE9 177 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 BCAS1O75363 584 aaPredicted RBP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 ALBP02768 609 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 GPIP06744 558 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 ALOX5P09917 674 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 ALDOCP09972 364 aaKnown RBP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 PLK1P53350 603 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 DNASE1L3Q13609 305 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 KIF19Q2TAC6 998 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 ZNF280DQ6N043 979 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 CYHR1Q6ZMK1 362 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 LARP4Q71RC2 724 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 STRADAQ7RTN6 431 aa17.2■□□□□ 0.34
SCUBE2-202ENST00000450649 SGCDQ92629 289 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms