RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 A0A1W2PQ72 361 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 H0Y858 1186 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 MRASO14807 208 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 AXIN1O15169 862 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 USP12O75317 370 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 ARHGEF15O94989 841 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 INMTO95050 263 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 STAU1O95793 577 aaKnown RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 HTR1AP08908 422 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 IL4RP24394 825 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 ARNTP27540 789 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 ALDH4A1P30038 563 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 OXTRP30559 389 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 SHMT2P34897 504 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 LIG4P49917 911 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 MRPL58Q14197 206 aaKnown RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 DPY19L1Q2PZI1 675 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 PITRM1Q5JRX3 1037 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 GJC2Q5T442 439 aaPredicted RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 FAM205BPQ63HN1 556 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 FAM45BPQ6NSW5 357 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 CASC4Q6P4E1 433 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 PAGE2Q7Z2X7 111 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 CDR2LQ86X02 465 aaPredicted RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 ERO1BQ86YB8 467 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 SPPL2CQ8IUH8 684 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.65□□□□□ -1.03
LSM5-208ENST00000450169 LEMD2Q8NC56 503 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 FAM45AQ8TCE6 357 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 DYNC2LI1Q8TCX1 351 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 AFG1LQ8WV93 481 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 GIMAP1Q8WWP7 306 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 ZNF606Q8WXB4 792 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 PIK3R3Q92569 461 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 PROX1Q92786 737 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 RTP4Q96DX8 246 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 MYRFLQ96LU7 910 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 KCTD14Q9BQ13 255 aaPredicted RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 BTBD2Q9BX70 525 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 IDI2Q9BXS1 227 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 MRPL9Q9BYD2 267 aaKnown RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 ST6GALNAC4Q9H4F1 302 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 NARFLQ9H6Q4 476 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 HPS4Q9NQG7 708 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 PLSCR3Q9NRY6 295 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 OXSMQ9NWU1 459 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 GMPR2Q9P2T1 348 aaKnown RBP8.65□□□□□ -1.03
LSM5-208ENST00000450169 PCSK1NQ9UHG2 260 aa8.65□□□□□ -1.03
LSM5-208ENST00000450169 CCDC78A2IDD5 438 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 WDR27A2RRH5 827 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 C12orf71A8MTZ7 269 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 SHOXO15266 292 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 GAS2O43903 313 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 NDUFS2O75306 463 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 GH2P01242 217 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 GSTM1P09488 218 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 IL7RP16871 459 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 HDCP19113 662 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 LRPAP1P30533 357 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 GARSP41250 739 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 HTR2BP41595 481 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 HTR3AP46098 478 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 GRIA4P48058 902 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CACNB3P54284 484 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 LSM3P62310 102 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 KRR1Q13601 381 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 STEAP4Q687X5 459 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 PTCRAQ6ISU1 281 aaPredicted RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 ERAP2Q6P179 960 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 C15orf39Q6ZRI6 1047 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 FAM160A2Q8N612 972 aaPredicted RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 TTLL6Q8N841 843 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 NAT16Q8N8M0 369 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 ANKRD52Q8NB46 1076 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CPXM1Q96SM3 734 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 AMNQ9BXJ7 453 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 FTHL17Q9BXU8 183 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 ALOXE3Q9BYJ1 711 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 INTS10Q9NVR2 710 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 SYBUQ9NX95 663 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 MTMR10Q9NXD2 777 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 TOR4AQ9NXH8 423 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CCDC167Q9P0B6 97 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 HMGXB4Q9UGU5 601 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 POLHQ9Y253 713 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 SNX5Q9Y5X3 404 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 LY75O60449 1722 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 A0A0G2JMP0 313 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 ENPP3O14638 875 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 TRIM16O95361 564 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 LSM8O95777 96 aaKnown RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 MYCP01106 439 aaPredicted RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 HLA-DRAP01903 254 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 MAGP20916 626 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 IL12AP29459 219 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 RFC2P35250 354 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 AP2S1P53680 142 aaPredicted RBP8.64□□□□□ -1.03
LSM5-208ENST00000450169 GABARAPL2P60520 117 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 VBP1P61758 197 aa8.64□□□□□ -1.03
LSM5-208ENST00000450169 CCNA1P78396 465 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms