RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 AURKAO14965 403 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 RNASEH1O60930 286 aaKnown RBP19.31■□□□□ 0.68
RPS28-202ENST00000449223 ADH1BP00325 375 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 ALPIP09923 528 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 HOXB2P14652 356 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 PAMP19021 973 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 LPOP22079 712 aaPredicted RBP19.31■□□□□ 0.68
RPS28-202ENST00000449223 ARNTP27540 789 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 WASP42768 502 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 ARCN1P48444 511 aaKnown RBP19.31■□□□□ 0.68
RPS28-202ENST00000449223 SATB1Q01826 763 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 SEPT6Q14141 434 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 LRRC32Q14392 662 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 RASA2Q15283 850 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 SKIDA1Q1XH10 827 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 KLHL38Q2WGJ6 581 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 EOGTQ5NDL2 527 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 ESRP1Q6NXG1 681 aaKnown RBP19.31■□□□□ 0.68
RPS28-202ENST00000449223 FAM131CQ96AQ9 280 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 SGSM3Q96HU1 749 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 SMIM14Q96QK8 99 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 ROPN1BQ9BZX4 212 aaPredicted RBP19.31■□□□□ 0.68
RPS28-202ENST00000449223 ROPN1Q9HAT0 212 aaPredicted RBP19.31■□□□□ 0.68
RPS28-202ENST00000449223 LTB4R2Q9NPC1 389 aa19.31■□□□□ 0.68
RPS28-202ENST00000449223 NPIPB15A6NHN6 443 aaPredicted RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 H7C0S8 307 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 IL1BP01584 269 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ZNF30P17039 623 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CTPS1P17812 591 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 TARSP26639 723 aaKnown RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 ABL2P42684 1182 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 FZD5Q13467 585 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 NAB1Q13506 487 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CNGA3Q16281 694 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 LONRF1Q17RB8 773 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ZNF776Q68DI1 518 aaPredicted RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 PDPK2PQ6A1A2 396 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 KIAA1211LQ6NV74 962 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 TRMT10BQ6PF06 316 aaKnown RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 CES3Q6UWW8 571 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CAPN12Q6ZSI9 719 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 MMAAQ8IVH4 418 aaKnown RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 RAVER1Q8IY67 606 aaKnown RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 GJD3Q8N144 294 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 RPLP0P6Q8NHW5 317 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ARRDC3Q96B67 414 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 EID2BQ96D98 161 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CCDC77Q9BR77 488 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 OSBPL6Q9BZF3 934 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ZFYVE1Q9HBF4 777 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 IL17CQ9P0M4 197 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 FBXL21Q9UKT6 434 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 NDRG2Q9UN36 371 aaKnown RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 AGPSO00116 658 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 SLC7A4O43246 635 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CYP2A6P11509 494 aaPredicted RBP19.3■□□□□ 0.68
RPS28-202ENST00000449223 C5AR1P21730 350 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 MMP12P39900 470 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ZBTB16Q05516 673 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ZNF844Q08AG5 666 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 MGAT5Q09328 741 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CST6Q15828 149 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 KBTBD12Q3ZCT8 623 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CRTC1Q6UUV9 634 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 DPPA4Q7L190 304 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 LYSMD3Q7Z3D4 306 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CROCCP2Q86T23 111 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 TDRPQ86YL5 185 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 CNTN4Q8IWV2 1026 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 PAF1Q8N7H5 531 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 RAB7BQ96AH8 199 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 DHRS4Q9BTZ2 278 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 ACBD3Q9H3P7 528 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 PCDH12Q9NPG4 1184 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 VPS18Q9P253 973 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 SLC2A6Q9UGQ3 507 aa19.3■□□□□ 0.68
RPS28-202ENST00000449223 C1orf232A0A0U1RR37 186 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 EXOC1LA0A1B0GW35 172 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 AREL1O15033 823 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 IVLP07476 585 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 LHCGRP22888 699 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 DRD3P35462 400 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 HADHAP40939 763 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 NEK3P51956 506 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 METAP1P53582 386 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 RPS14P62263 151 aaKnown RBP19.29■□□□□ 0.68
RPS28-202ENST00000449223 PTPRRQ15256 657 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 ERN2Q76MJ5 926 aaKnown RBP19.29■□□□□ 0.68
RPS28-202ENST00000449223 TTC7BQ86TV6 843 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 CNPY4Q8N129 248 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 CBARPQ8N350 705 aaPredicted RBP19.29■□□□□ 0.68
RPS28-202ENST00000449223 OR2W6PQ8NHA6 318 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 UHMK1Q8TAS1 419 aaKnown RBP19.29■□□□□ 0.68
RPS28-202ENST00000449223 DNAJC1Q96KC8 554 aaKnown RBP19.29■□□□□ 0.68
RPS28-202ENST00000449223 GPR63Q9BZJ6 419 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 MKRN2Q9H000 416 aaKnown RBP19.29■□□□□ 0.68
RPS28-202ENST00000449223 DYRK4Q9NR20 520 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 EURLQ9NYK6 297 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 B4GALT6Q9UBX8 382 aa19.29■□□□□ 0.68
RPS28-202ENST00000449223 SLC24A2Q9UI40 661 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms