RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 SRSF6Q13247 344 aaKnown RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 RFTN1Q14699 578 aaPredicted RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 PAFAH1B3Q15102 231 aaKnown RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 TGIF1Q15583 401 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 SKIDA1Q1XH10 827 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 POM121L1PQ3SYA9 428 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 C11orf63Q6NUN7 778 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 ARHGAP36Q6ZRI8 547 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 LRRC49Q8IUZ0 686 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 PQLC3Q8N755 202 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 ACRBPQ8NEB7 543 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 GRIN3AQ8TCU5 1115 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 DUSP23Q9BVJ7 150 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 HDAC8Q9BY41 377 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 EPN3Q9H201 632 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 KDM4CQ9H3R0 1056 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 GRPEL1Q9HAV7 217 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 GEMIN8Q9NWZ8 242 aaKnown RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 DDX56Q9NY93 547 aaKnown RBP12.56□□□□□ -0.4
SSR4-205ENST00000447375 LHX3Q9UBR4 397 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 HYOU1Q9Y4L1 999 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 FLNCQ14315 2725 aa12.56□□□□□ -0.4
SSR4-205ENST00000447375 CPED1A4D0V7 1026 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 LRRD1A4D1F6 860 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 K7ESM1 405 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 KPNA3O00505 521 aaPredicted RBP12.55□□□□□ -0.4
SSR4-205ENST00000447375 SPOPO43791 374 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 NOBOXO60393 691 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 PALMO75781 387 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 PIAS2O75928 621 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 PEX11BO96011 259 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 SLC5A2P31639 672 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 RHOAP61586 193 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 CCDC15Q0P6D6 951 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 ZFYVE27Q5T4F4 411 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 ATXN7L2Q5T6C5 722 aaPredicted RBP12.55□□□□□ -0.4
SSR4-205ENST00000447375 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 AGBL4Q5VU57 503 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 NCBP2-AS2Q69YL0 99 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 EFL1Q7Z2Z2 1120 aaKnown RBP12.55□□□□□ -0.4
SSR4-205ENST00000447375 GDAP1L1Q96MZ0 367 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 ZNF599Q96NL3 588 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 RNF157Q96PX1 679 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 CPEB1Q9BZB8 566 aaKnown RBP12.55□□□□□ -0.4
SSR4-205ENST00000447375 GOLPH3Q9H4A6 298 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 CAAP1Q9H8G2 361 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 SP110Q9HB58 689 aa12.55□□□□□ -0.4
SSR4-205ENST00000447375 CCDC187A0A096LP49 1063 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 GOLGA6L3A6NEY3 463 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 KRIT1O00522 736 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 SCAMP1O15126 338 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 PSTPIP1O43586 416 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 PLRG1O43660 514 aaKnown RBP12.54□□□□□ -0.4
SSR4-205ENST00000447375 TCEA3O75764 348 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 KRT38O76015 456 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 IGSF6O95976 241 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 ITGB7P26010 798 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 GKP32189 559 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 CSNK1DP48730 415 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 TAS2R38P59533 333 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 RAD51Q06609 339 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 NSUN2Q08J23 767 aaKnown RBP eCLIP12.54□□□□□ -0.4
SSR4-205ENST00000447375 GALNT2Q10471 571 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 CLCA4Q14CN2 919 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 TAZQ16635 292 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 CDKN3Q16667 212 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 SETMARQ53H47 684 aaPredicted RBP12.54□□□□□ -0.4
SSR4-205ENST00000447375 ZNF805Q5CZA5 627 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 TMCO4Q5TGY1 634 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 ERN2Q76MJ5 926 aaKnown RBP12.54□□□□□ -0.4
SSR4-205ENST00000447375 DAAM2Q86T65 1068 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 KIAA1328Q86T90 577 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 TXLNBQ8N3L3 684 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 RYBPQ8N488 228 aaPredicted RBP12.54□□□□□ -0.4
SSR4-205ENST00000447375 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 TSEN2Q8NCE0 465 aaKnown RBP12.54□□□□□ -0.4
SSR4-205ENST00000447375 OR6K2Q8NGY2 324 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 FATE1Q969F0 183 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 LIN37Q96GY3 246 aaPredicted RBP12.54□□□□□ -0.4
SSR4-205ENST00000447375 PPP1R16AQ96I34 528 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 PSKH2Q96QS6 385 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 OSBPL1AQ9BXW6 950 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 ZDHHC6Q9H6R6 413 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 DYRK4Q9NR20 520 aa12.54□□□□□ -0.4
SSR4-205ENST00000447375 KIF26BQ2KJY2 2108 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 MFSD11O43934 449 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 RNGTTO60942 597 aaKnown RBP12.53□□□□□ -0.4
SSR4-205ENST00000447375 NEBLO76041 1014 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 TNNT1P13805 278 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 GARSP41250 739 aaKnown RBP12.53□□□□□ -0.4
SSR4-205ENST00000447375 CYP4F2P78329 520 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 SLC10A7Q0GE19 358 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 SLC10A2Q12908 348 aaPredicted RBP12.53□□□□□ -0.4
SSR4-205ENST00000447375 LBRQ14739 615 aaKnown RBP12.53□□□□□ -0.4
SSR4-205ENST00000447375 SLC9A4Q6AI14 798 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 NEK5Q6P3R8 708 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 GUSBP11Q6P575 273 aa12.53□□□□□ -0.4
SSR4-205ENST00000447375 CRTC1Q6UUV9 634 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms