RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ZBED8Q8IZ13 594 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 HDDC3Q8N4P3 179 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 TSTD1Q8NFU3 115 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 BLOC1S5Q8TDH9 187 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 HMGB4Q8WW32 186 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 PEX13Q92968 403 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 ZNF778Q96MU6 729 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 C19orf43Q9BQ61 176 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 MRM3Q9HC36 420 aaKnown RBP15.15■□□□□ 0.02
CCNE1-203ENST00000444983 CD93Q9NPY3 652 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 DYRK4Q9NR20 520 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.15■□□□□ 0.02
CCNE1-203ENST00000444983 GGT7Q9UJ14 662 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 RIMKLBQ9ULI2 386 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 SOX13Q9UN79 622 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 ZNF711Q9Y462 761 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 TCAF1Q9Y4C2 921 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 FADS3Q9Y5Q0 445 aa15.15■□□□□ 0.02
CCNE1-203ENST00000444983 LRRK1Q38SD2 2015 aa15.14■□□□□ 0.02
CCNE1-203ENST00000444983 FAM237BA0A1B0GVD1 139 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 HEATR9A2RTY3 570 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 CCDC151A5D8V7 595 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 SLC7A4O43246 635 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 MAGEA4P43358 317 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 CXCL12P48061 93 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 SEMG2Q02383 582 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 SLMAPQ14BN4 828 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 TTC31Q49AM3 519 aaPredicted RBP15.14■□□□□ 0.01
CCNE1-203ENST00000444983 TMEM52BQ4KMG9 183 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 HP1BP3Q5SSJ5 553 aaPredicted RBP15.14■□□□□ 0.01
CCNE1-203ENST00000444983 DENND2CQ68D51 928 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 EMBQ6PCB8 327 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.14■□□□□ 0.01
CCNE1-203ENST00000444983 LYSMD3Q7Z3D4 306 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 KBTBD6Q86V97 674 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 CCNJLQ8IV13 435 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 FBXO36Q8NEA4 188 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 CAVIN3Q969G5 261 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 STAMBPL1Q96FJ0 436 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 HHIPQ96QV1 700 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 TRIM56Q9BRZ2 755 aaKnown RBP15.14■□□□□ 0.01
CCNE1-203ENST00000444983 NAT9Q9BTE0 207 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 ZFYVE1Q9HBF4 777 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 SAYSD1Q9NPB0 183 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 TREX1Q9NSU2 369 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 ARL5AQ9Y689 179 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 NUMA1Q14980 2115 aa15.14■□□□□ 0.01
CCNE1-203ENST00000444983 H0Y858 1186 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 PLRG1O43660 514 aaKnown RBP15.13■□□□□ 0.01
CCNE1-203ENST00000444983 RNASEH2AO75792 299 aaKnown RBP15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CLDN7O95471 211 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CRTAMO95727 393 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CYP2A6P11509 494 aaPredicted RBP15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ZNF30P17039 623 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 NFKBIAP25963 317 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 HOXA6P31267 233 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 VIPR1P32241 457 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CCR3P51677 355 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ZNF140P52738 457 aaPredicted RBP15.13■□□□□ 0.01
CCNE1-203ENST00000444983 FAM193AP78312 1265 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CREB5Q02930 508 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ACVR1Q04771 509 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CCDC15Q0P6D6 951 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ELP6Q0PNE2 266 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 BRD3Q15059 726 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 LRRC66Q68CR7 880 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ANO7Q6IWH7 933 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ERAP2Q6P179 960 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 NLRP9Q7RTR0 991 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 GLT6D1Q7Z4J2 308 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 CCDC25Q86WR0 208 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 OR13J1Q8NGT2 312 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 HNRNPLLQ8WVV9 542 aaKnown RBP15.13■□□□□ 0.01
CCNE1-203ENST00000444983 OMDQ99983 421 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 LRRC4CQ9HCJ2 640 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 IL17CQ9P0M4 197 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ITM2BQ9Y287 266 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 KCTD3Q9Y597 815 aa15.13■□□□□ 0.01
CCNE1-203ENST00000444983 ZNF106Q9H2Y7 1883 aaKnown RBP15.13■□□□□ 0.01
CCNE1-203ENST00000444983 C1orf232A0A0U1RR37 186 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ZCWPW2A0A1B0GU75 182 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 A8MX80 341 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 USP1O94782 785 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ALDH1A2O94788 518 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 APBB3O95704 486 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 GM2AP17900 193 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PGAM1P18669 254 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 XPAP23025 273 aaPredicted RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 SFSWAPQ12872 951 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 LAMB3Q13751 1172 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 CNGA3Q16281 694 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 STEAP4Q687X5 459 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 LIPIQ6XZB0 460 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ANKMY2Q8IV38 441 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 RAVER1Q8IY67 606 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PAF1Q8N7H5 531 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 TMEM105Q8N8V8 129 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PPHLN1Q8NEY8 458 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PYROXD1Q8WU10 500 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 MFSD3Q96ES6 412 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms