RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 KCTD4Q8WVF5 259 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 APOL2Q9BQE5 337 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TMEM246Q9BRR3 403 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TTYH2Q9BSA4 534 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CHST12Q9NRB3 414 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 DCCP43146 1447 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 EFCAB9A8MZ26 197 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 RGS13O14921 159 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TBX1O43435 398 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PTTG1O95997 202 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 HMGB2P26583 209 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 ELK4P28324 431 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 GTF2A2P52657 109 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 DOK7Q18PE1 504 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 INAVAQ3KP66 663 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 UBASH3BQ8TF42 649 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 EXT2Q93063 718 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.03□□□□□ -1.6
HERC1-201ENST00000443617 TEX13BQ9BXU2 312 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CDHR5Q9HBB8 845 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 KIAA1522Q9P206 1035 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 COL1A1P02452 1464 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 NCK1P16333 377 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 SEMA5AQ13591 1074 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 RFX4Q33E94 735 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 IRAK1BP1Q5VVH5 260 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 FAM35AQ86V20 835 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ANGPTL6Q8NI99 470 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 RNF34Q969K3 372 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 UGT2B28Q9BY64 529 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 KIF17Q9P2E2 1029 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CNTN6Q9UQ52 1028 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 UGT2A1Q9Y4X1 527 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 IGLV3-22A0A075B6J6 115 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 A0A087X1B8 175 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 C9JVG2 144 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 IL18RAPO95256 599 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ZNF37AP17032 561 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 LBPP18428 481 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 FMO3P31513 532 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 GMPRP36959 345 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 BNC1Q01954 994 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MTERF2Q49AM1 385 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TMEM236Q5W0B7 351 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 FAM45BPQ6NSW5 357 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PRR23BQ6ZRT6 265 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 LRRC20Q8TCA0 184 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 FAM45AQ8TCE6 357 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 CERS2Q96G23 380 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 BBS2Q9BXC9 721 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 IRF2BPLQ9H1B7 796 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 RP1P56715 2156 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 TMCC2O75069 709 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 WDR47O94967 919 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ALDH3A2P51648 485 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 NIPAL4Q0D2K0 466 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 XYLT1Q86Y38 959 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 EMILIN2Q9BXX0 1053 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ITM2CQ9NQX7 267 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 SLC22A3O75751 556 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ALX3O95076 343 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 GABRB3P28472 473 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 UGCGQ16739 394 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 DESI1Q6ICB0 168 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MFSD3Q96ES6 412 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MMP27Q9H306 513 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PAQR5Q9NXK6 330 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 ZNF335Q9H4Z2 1342 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 TYW5A2RUC4 315 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 TPPPO94811 219 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 F7P08709 466 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 YBX3P16989 372 aaKnown RBP eCLIP5.03□□□□□ -1.64e-6■■□□□ 12.4
HERC1-201ENST00000443617 PAMP19021 973 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PTPN9P43378 593 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PIGFQ07326 219 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ZNF252P-AS1Q0IIN9 211 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 SHROOM1Q2M3G4 852 aaPredicted RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 ZNF470Q6ECI4 717 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ADHFE1Q8IWW8 467 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 ADGRG5Q8IZF4 528 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 SVOPLQ8N434 492 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 NTPCRQ9BSD7 190 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 NARFQ9UHQ1 456 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PCDHGA10Q9Y5H3 936 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 N6AMT1Q9Y5N5 214 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PSMD3O43242 534 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 NPY2RP49146 381 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 EEFSECP57772 596 aaKnown RBP5.03□□□□□ -1.6
HERC1-201ENST00000443617 DMC1Q14565 340 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 MEP1AQ16819 746 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 IMPG1Q17R60 797 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PKN3Q6P5Z2 889 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 NSMCE2Q96MF7 247 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 KIAA1257Q9ULG3 409 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 H0Y858 1186 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 UBXN8O00124 270 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 KMOO15229 486 aa5.03□□□□□ -1.6
HERC1-201ENST00000443617 PPP5CP53041 499 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms