RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 GBA3Q9H227 469 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 GAREM1Q9H706 876 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 FZD3Q9NPG1 666 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 FSCN3Q9NQT6 498 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 HOMER3Q9NSC5 361 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 RXFP3Q9NSD7 469 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 GOLGA6AQ9NYA3 693 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 AAR2Q9Y312 384 aaKnown RBP10.87□□□□□ -0.67
HDAC6-211ENST00000443563 SNX11Q9Y5W9 270 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 SLCO1B1Q9Y6L6 691 aa10.87□□□□□ -0.67
HDAC6-211ENST00000443563 C5orf60A6NFR6 353 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CAPN8A6NHC0 703 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 NPIPB15A6NHN6 443 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 C4orf47A7E2U8 309 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 WNT9AO14904 365 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CEP104O60308 925 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 HEXIM1O94992 359 aaKnown RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 EPOP01588 193 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 WNT1P04628 370 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CTPS1P17812 591 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CD68P34810 354 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 ACTN2P35609 894 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 HNF1BP35680 557 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 ARRB1P49407 418 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CCT8P50990 548 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 RALGDSQ12967 914 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 SUZ12Q15022 739 aaKnown RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 ACOX1Q15067 660 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CNGA3Q16281 694 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 PCSK7Q16549 785 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CCNG2Q16589 344 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 LONRF2Q1L5Z9 754 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 GCNT7Q6ZNI0 430 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 ARHGEF18Q6ZSZ5 1173 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 PTAR1Q7Z6K3 402 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 SLC35F6Q8N357 371 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 TP53I13Q8NBR0 393 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 ATL2Q8NHH9 583 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 SPATA22Q8NHS9 363 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 SLC35B2Q8TB61 432 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 CCHCR1Q8TD31 782 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 SPATA13Q96N96 652 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 LYSMD1Q96S90 227 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 ELF4Q99607 663 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 KLF6Q99612 283 aaPredicted RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 FAM118BQ9BPY3 351 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 USP29Q9HBJ7 922 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 R3HDM2Q9Y2K5 976 aaKnown RBP10.86□□□□□ -0.67
HDAC6-211ENST00000443563 COQ6Q9Y2Z9 468 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 PCDHGB2Q9Y5G2 931 aa10.86□□□□□ -0.67
HDAC6-211ENST00000443563 DNAH14Q0VDD8 3507 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PTPRZ1P23471 2315 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-211ENST00000443563 TCRBV7S2A1N4TA0A589 114 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 RGSL1A5PLK6 1076 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 A8MX80 341 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 CES2O00748 559 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 ENC1O14682 589 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 RAD51BO15315 384 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PSMD3O43242 534 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 LIASO43766 372 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PMPCBO75439 489 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 GCATO75600 419 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 RECQL5O94762 991 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-211ENST00000443563 NDST3O95803 873 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 MT-CYBP00156 380 aaPredicted RBP10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PRLP01236 227 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 FGGP02679 453 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PYGLP06737 847 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 ALPIP09923 528 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 HLA-DPA1P20036 260 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 CXCR5P32302 372 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 ID4P47928 161 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 THOP1P52888 689 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 CLDN2P57739 230 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 BNC1Q01954 994 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 SEMG2Q02383 582 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 MTM1Q13496 603 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 IHHQ14623 411 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PUM1Q14671 1186 aaKnown RBP eCLIP10.85□□□□□ -0.67
HDAC6-211ENST00000443563 IRF4Q15306 451 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 QPCTQ16769 361 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 INAVAQ3KP66 663 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 UAP1L1Q3KQV9 507 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 CRTC1Q6UUV9 634 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 LAYNQ6UX15 382 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 Q6ZSR6 202 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 NRSN1Q8IZ57 195 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 OR13H1Q8NG92 308 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 NUS1Q96E22 293 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 BMFQ96LC9 184 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 COQ10AQ96MF6 247 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 TRIB3Q96RU7 358 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 FSD1LQ9BXM9 530 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 C10orf88Q9H8K7 445 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 MAGEE1Q9HCI5 957 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 RAD18Q9NS91 495 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 TM7SF3Q9NS93 570 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 DLL3Q9NYJ7 618 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 UBP1Q9NZI7 540 aa10.85□□□□□ -0.67
HDAC6-211ENST00000443563 PYCARDQ9ULZ3 195 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms