RNA–Protein interactions for RNA: ENST00000442510.6

PTPRC-209, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRC, Length 5,164 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-209ENST00000442510 SPATA31D3P0C874 917 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CABP4P57796 275 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 AP3S2P59780 193 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TFAMQ00059 246 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CAP1Q01518 475 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TRIM28Q13263 835 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SPCS2Q15005 226 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CHI3L2Q15782 390 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TUSC1Q2TAM9 212 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RBM48Q5RL73 367 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 AVPI1Q5T686 147 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FAM131AQ6UXB0 335 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SPATA31D4Q6ZUB0 917 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SYDE1Q6ZW31 735 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 LINC00523Q86TU6 105 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TAGAPQ8N103 731 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SMG8Q8ND04 991 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RBM15BQ8NDT2 890 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 EEF1AKMT1Q8WVE0 214 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ADIPOR1Q96A54 375 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RAB7BQ96AH8 199 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ELMO3Q96BJ8 720 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FAM136AQ96C01 138 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TXNDC15Q96J42 360 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 VAT1Q99536 393 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 WDR77Q9BQA1 342 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 C7orf50Q9BRJ6 194 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ATXN3LQ9H3M9 355 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TFR2Q9UP52 801 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CDY1Q9Y6F8 540 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 GAPVD1Q14C86 1478 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PNMA6FA0A0J9YX94 578 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 C6orf229H3BNL8 230 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 IRS4O14654 1257 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RGS14O43566 566 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FAM20BO75063 409 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PTCD1O75127 700 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RHOBTB3O94955 611 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF888P0CJ79 500 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 GZMAP12544 262 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MLNP12872 115 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 EIF2DP41214 584 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CASP3P42574 277 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 BCAR1P56945 870 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF211Q13398 564 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SNTA1Q13424 505 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FGFBP1Q14512 234 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PDK4Q16654 411 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 LCN1P1Q5VSP4 162 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 KANK2Q63ZY3 851 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 MOXD1Q6UVY6 613 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 RTL10Q7L3V2 364 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SSX7Q7RTT5 188 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 HPS6Q86YV9 775 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CFAP206Q8IYR0 622 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PLD6Q8N2A8 252 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 UXS1Q8NBZ7 420 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 OR52N1Q8NH53 320 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 FBXW5Q969U6 566 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF317Q96PQ6 595 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 LGMNQ99538 433 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ANO3Q9BYT9 981 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PRKD2Q9BZL6 878 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CDC42EP4Q9H3Q1 356 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 NOL11Q9H8H0 719 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 CARS2Q9HA77 564 aaKnown RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 SPON1Q9HCB6 807 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 DNAJC28Q9NX36 388 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF282Q9UDV7 671 aaPredicted RBP5.61□□□□□ -1.51
PTPRC-209ENST00000442510 EBF1Q9UH73 591 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 TUBE1Q9UJT0 475 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 DNMT3LQ9UJW3 386 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 PPM1HQ9ULR3 514 aa5.61□□□□□ -1.51
PTPRC-209ENST00000442510 ZMYM2Q9UBW7 1377 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 A0A096LPI6 279 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 A0A0A6YYH2 397 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 RGSL1A5PLK6 1076 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 A6NJ64 397 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 DCDC2CA8MYV0 355 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 CYP26A1O43174 497 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 PLIN3O60664 434 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 LILRB3O75022 631 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 SLC2A5P22732 501 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 PPP5CP53041 499 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 CDH15P55291 814 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 CACNB2Q08289 660 aaPredicted RBP5.6□□□□□ -1.51
PTPRC-209ENST00000442510 AUHQ13825 339 aaKnown RBP5.6□□□□□ -1.51
PTPRC-209ENST00000442510 ACOX1Q15067 660 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 POU4F3Q15319 338 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 ZNF174Q15697 407 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 PAN2Q504Q3 1202 aaKnown RBP5.6□□□□□ -1.51
PTPRC-209ENST00000442510 OTUD3Q5T2D3 398 aaPredicted RBP5.6□□□□□ -1.51
PTPRC-209ENST00000442510 ADGRF1Q5T601 910 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 IZUMO3Q5VZ72 239 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 PRMT9Q6P2P2 845 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 EEPD1Q7L9B9 569 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 LHFPL3Q86UP9 236 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 TSPYL5Q86VY4 417 aaPredicted RBP5.6□□□□□ -1.51
PTPRC-209ENST00000442510 DHFR2Q86XF0 187 aa5.6□□□□□ -1.51
PTPRC-209ENST00000442510 ZSWIM9Q86XI8 627 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms