RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 TFAP2AP05549 437 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 MBL2P11226 248 aaPredicted RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SLC1A2P43004 574 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 FRG1Q14331 258 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PCLAFQ15004 111 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TLR1Q15399 786 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 INSCQ1MX18 579 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TCHHL1Q5QJ38 904 aaPredicted RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TPGS2Q68CL5 300 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 TMC7Q7Z402 723 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 RNF135Q8IUD6 432 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 KLHDC8BQ8IXV7 354 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 SLC39A11Q8N1S5 342 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PPP4R1Q8TF05 950 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PTCD2Q8WV60 388 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CYP2S1Q96SQ9 504 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 PRKD2Q9BZL6 878 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 UNKQ9C0B0 810 aaKnown RBP14.22□□□□□ -0.13
LIMD1-202ENST00000440097 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 CDH22Q9UJ99 828 aa14.22□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.21□□□□□ -0.13
LIMD1-202ENST00000440097 A0A0J9YVX5 310 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 PRAMEF11O60813 436 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 ABLIM3O94929 683 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 CLPTM1O96005 669 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 RHOCP08134 193 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 PIRTP0C851 137 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 RALBP11234 206 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 RPL5P46777 297 aaKnown RBP14.21□□□□□ -0.13
LIMD1-202ENST00000440097 SLC1A6P48664 564 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 COPAP53621 1224 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 PRAMEP78395 509 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF177Q13360 481 aaPredicted RBP14.21□□□□□ -0.13
LIMD1-202ENST00000440097 TUBB3Q13509 450 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 ZNF460Q14592 562 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 CCDC153Q494R4 210 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 NADK2Q4G0N4 442 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 STXBP5Q5T5C0 1151 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 NEPROQ6NW34 567 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 PTAR1Q7Z6K3 402 aaPredicted RBP14.21□□□□□ -0.13
LIMD1-202ENST00000440097 DNAJB7Q7Z6W7 309 aaPredicted RBP14.21□□□□□ -0.13
LIMD1-202ENST00000440097 METTL25Q8N6Q8 603 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 MIPOL1Q8TD10 442 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 JADE3Q92613 823 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 ELMO2Q96JJ3 720 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 ATP13A1Q9HD20 1204 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 MRPL17Q9NRX2 175 aaKnown RBP14.21□□□□□ -0.13
LIMD1-202ENST00000440097 POMPQ9Y244 141 aa14.21□□□□□ -0.13
LIMD1-202ENST00000440097 SLC4A1P02730 911 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 ATP5BP06576 529 aaKnown RBP14.21□□□□□ -0.14
LIMD1-202ENST00000440097 MMP2P08253 660 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 LAG3P18627 525 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 GLDCP23378 1020 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 ITGB8P26012 769 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 TPP2P29144 1249 aaPredicted RBP14.21□□□□□ -0.14
LIMD1-202ENST00000440097 EPHB3P54753 998 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 OXCT1P55809 520 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 GALNT3Q14435 633 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 LRRC26Q2I0M4 334 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 SIRPB2Q5JXA9 342 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 MBLAC2Q68D91 279 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 PGM2L1Q6PCE3 622 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 HPS6Q86YV9 775 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 WDR75Q8IWA0 830 aaKnown RBP14.21□□□□□ -0.14
LIMD1-202ENST00000440097 RNF168Q8IYW5 571 aaPredicted RBP14.21□□□□□ -0.14
LIMD1-202ENST00000440097 PNPLA1Q8N8W4 532 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 OR52K2Q8NGK3 314 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 RAB3IL1Q8TBN0 382 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 SREK1Q8WXA9 508 aaKnown RBP14.21□□□□□ -0.14
LIMD1-202ENST00000440097 OVCA2Q8WZ82 227 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 BTBD9Q96Q07 612 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 CINPQ9BW66 212 aaPredicted RBP14.21□□□□□ -0.14
LIMD1-202ENST00000440097 NMRAL1Q9HBL8 299 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 CIDEBQ9UHD4 219 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 PCDHGB4Q9UN71 923 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 DTNAQ9Y4J8 743 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 PCDHGB5Q9Y5G0 923 aa14.21□□□□□ -0.14
LIMD1-202ENST00000440097 FAM95CA0A1B0GW59 222 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 MUSKO15146 869 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 ITM2AO43736 263 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 SERPINF2P08697 491 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 CCDC166P0CW27 439 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 ARNTP27540 789 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 GABRB3P28472 473 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 PMLP29590 882 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 ARCN1P48444 511 aaKnown RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 SGSHP51688 502 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 CDH4P55283 916 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 C1QTNF8P60827 252 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 RPL26P61254 145 aaKnown RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 PEX6Q13608 980 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 SPATA6LQ8N4H0 392 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 PLD4Q96BZ4 506 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 GPR22Q99680 433 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 GRIP2Q9C0E4 1043 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 CRISPLD2Q9H0B8 497 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 FBXO5Q9UKT4 447 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 AGO1Q9UL18 857 aaKnown RBP14.2□□□□□ -0.14
LIMD1-202ENST00000440097 SORCS3Q9UPU3 1222 aa14.2□□□□□ -0.14
LIMD1-202ENST00000440097 DNAJC16Q9Y2G8 782 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms