RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 CITO14578 2027 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 AXIN1O15169 862 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 INPP4BO15327 924 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 GSTT2P0CG29 244 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 GSTT2BP0CG30 244 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 SLC25A52Q3SY17 297 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 CYBRD1Q53TN4 286 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 ARHGAP36Q6ZRI8 547 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 IGFN1Q86VF2 1251 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 EXT2Q93063 718 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 SPATA33Q96N06 139 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 DOK1Q99704 481 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 SLX1AQ9BQ83 275 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 PCDH12Q9NPG4 1184 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 ARMC1Q9NVT9 282 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 TCAF1Q9Y4C2 921 aa13.6□□□□□ -0.23
PCNX3-202ENST00000439247 MAGED1Q9Y5V3 778 aaPredicted RBP13.6□□□□□ -0.23
PCNX3-202ENST00000439247 A8MT66 165 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 DYNC1LI2O43237 492 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF12P17014 697 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 KCNC1P48547 511 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 BST2Q10589 180 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 GRB14Q14449 540 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 PAFAH1B3Q15102 231 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 OTUD3Q5T2D3 398 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ARHGAP17Q68EM7 881 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 FAM117BQ6P1L5 589 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 C8orf82Q6P1X6 216 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 C17orf99Q6UX52 265 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 STRADAQ7RTN6 431 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 DPP9Q86TI2 863 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 DDIASQ8IXT1 998 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 SMG8Q8ND04 991 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 TNIP2Q8NFZ5 429 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CHPT1Q8WUD6 406 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 DUS3LQ96G46 650 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 HNRNPABQ99729 332 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 OLFM1Q99784 485 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 MEAF6Q9HAF1 191 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CMTM6Q9NX76 183 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 EVLQ9UI08 416 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CFAP99D6REC4 459 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CAPN3P20807 821 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CHRNA4P43681 627 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 TMED10P49755 219 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CCT8P50990 548 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CAP1Q01518 475 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 BFSP2Q13515 415 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 FAM83EQ2M2I3 478 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 FUT11Q495W5 492 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 PLEKHH3Q7Z736 793 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF419Q96HQ0 510 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 SEPHS2Q99611 448 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 SLC25A23Q9BV35 468 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ARHGAP39Q9C0H5 1083 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 GBA3Q9H227 469 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 SNTG2Q9NY99 539 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 IFT80Q9P2H3 777 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 A0A0J9YYE9 177 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 LRRC14BA6NHZ5 514 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 TOR1BO14657 336 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 NPHS1O60500 1241 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 FASP25445 335 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 NOS2P35228 1153 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 HK2P52789 917 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ATP6AP1Q15904 470 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 MOGQ16653 247 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 CYP51A1Q16850 503 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 UGT3A2Q3SY77 523 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 FBXO48Q5FWF7 155 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 RABL3Q5HYI8 236 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ZNF470Q6ECI4 717 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ABRAXAS1Q6UWZ7 409 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 PIWIL4Q7Z3Z4 852 aaKnown RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 LDB1Q86U70 411 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 ADGRG5Q8IZF4 528 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 SLC7A5P1Q8MH63 180 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 IPMKQ8NFU5 416 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 DNAJB14Q8TBM8 379 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 SNX19Q92543 992 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 IGSF5Q9NSI5 407 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 PRMT7Q9NVM4 692 aaPredicted RBP13.59□□□□□ -0.23
PCNX3-202ENST00000439247 PLXNA1Q9UIW2 1896 aa13.59□□□□□ -0.23
PCNX3-202ENST00000439247 TRIM64A6NGJ6 449 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 SOBPA7XYQ1 873 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ZNF701M0R085 212 aaPredicted RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 CCL22O00626 93 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 SPTLC1O15269 473 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 HSPA8P11142 646 aaKnown RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 CCNA2P20248 432 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 IDUAP35475 653 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 GRB7Q14451 532 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 RGS21Q2M5E4 152 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 INTS11Q5TA45 600 aaKnown RBP13.58□□□□□ -0.24
PCNX3-202ENST00000439247 BTBD8Q5XKL5 378 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 FAM45BPQ6NSW5 357 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 FAM45AQ8TCE6 357 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 ANKRD49Q8WVL7 239 aa13.58□□□□□ -0.24
PCNX3-202ENST00000439247 MAF1Q9H063 256 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms