RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GGA2Q9UJY4 613 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 KLF8O95600 359 aaPredicted RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 AVPR1BP47901 424 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 POLE2P56282 527 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 TAS2R50P59544 299 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 IRX1P78414 480 aaPredicted RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 SEMG2Q02383 582 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 CTBP1Q13363 440 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 BMT2Q1RMZ1 405 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 TMEM220Q6QAJ8 160 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 FAM46DQ8NEK8 389 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 LNX1Q8TBB1 728 aaPredicted RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 AARSD1Q9BTE6 412 aaKnown RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 WDR26Q9H7D7 661 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 PCDH18Q9HCL0 1135 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 NDUFAF1Q9Y375 327 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 TBC1D25Q3MII6 688 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 POMZP3Q6PJE2 187 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 ZC3H7AQ8IWR0 971 aaKnown RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 CERS2Q96G23 380 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 C12orf66Q96MD2 445 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 INSIG1O15503 277 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 F2P00734 622 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 CA3P07451 260 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 TFEBP19484 476 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 GHRHRQ02643 423 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 RPL6Q02878 288 aaKnown RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 ST3GAL1Q11201 340 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 NFATC2Q13469 925 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 CPSF6Q16630 551 aaKnown RBP eCLIP12.12□□□□□ -0.47
NEK1-201ENST00000439128 ATP13A5Q4VNC0 1218 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 HYIQ5T013 277 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 LRRC38Q5VT99 294 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 C16orf87Q6PH81 154 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 PMEPA1Q969W9 287 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 FZD8Q9H461 694 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 NSUN3Q9H649 340 aaKnown RBP12.12□□□□□ -0.47
NEK1-201ENST00000439128 COMMD8Q9NX08 183 aa12.12□□□□□ -0.47
NEK1-201ENST00000439128 TMEM191CA6NGB0 347 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 AP1S1P61966 158 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 BNC1Q01954 994 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 FAAP100Q0VG06 881 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 WLSQ5T9L3 541 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 FBXO15Q8NCQ5 510 aaPredicted RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 ATP6V1C2Q8NEY4 427 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 P2RY11Q96G91 374 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 IGSF21Q96ID5 467 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 DEPDC7Q96QD5 511 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 SGK2Q9HBY8 427 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 KCTD5Q9NXV2 234 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 HCN4Q9Y3Q4 1203 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 ULK1O75385 1050 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 TIMP1P01033 207 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 NR2F1P10589 423 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 HOXC12P31275 282 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CASRP41180 1078 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 PRKAA2P54646 552 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 ADCK1Q86TW2 530 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 C12orf56Q8IXR9 622 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 OR52K2Q8NGK3 314 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 UTP15Q8TED0 518 aaKnown RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 GAL3ST4Q96RP7 486 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 S100A13Q99584 98 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 P2RY13Q9BPV8 354 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 EPN3Q9H201 632 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CCSER2Q9H7U1 834 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 ANAPC2Q9UJX6 822 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 HEBP2Q9Y5Z4 205 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 KLRC4O43908 158 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 SERPINE1P05121 402 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 IFNGR2P38484 337 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 NEK3P51956 506 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CDK16Q00536 496 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 OC90Q02509 493 aaPredicted RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 R3HCC1LQ7Z5L2 792 aaKnown RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 SPATA6LQ8N4H0 392 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 ZBTB2Q8N680 514 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CLP1Q92989 425 aaKnown RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 NUSAP1Q9BXS6 441 aaKnown RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 MCIDASD6RGH6 385 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 RPP40O75818 363 aaKnown RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 PRAMEF1O95521 474 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 NT5EP21589 574 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CACNG1Q06432 222 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 LPAL2Q16609 132 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 FGD2Q7Z6J4 655 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 TCF7L2Q9NQB0 619 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 LIMD1Q9UGP4 676 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 PIK3C2AO00443 1686 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 H3BN98 237 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 FASTKQ14296 549 aaKnown RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 TRIP10Q15642 601 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 CERCAMQ5T4B2 595 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 BNC2Q6ZN30 1099 aaPredicted RBP12.11□□□□□ -0.47
NEK1-201ENST00000439128 LRRC55Q6ZSA7 311 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 SLC4A11Q8NBS3 891 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 OR2AG1Q9H205 316 aa12.11□□□□□ -0.47
NEK1-201ENST00000439128 COQ6Q9Y2Z9 468 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms