RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 TM7SF2O76062 418 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 SLU7O95391 586 aaKnown RBP11.52□□□□□ -0.57
SNHG3-202ENST00000437681 PIGNO95427 931 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 TUBB4BP68371 445 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 ILF2Q12905 390 aaKnown RBP11.52□□□□□ -0.57
SNHG3-202ENST00000437681 MTM1Q13496 603 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 ABI3BPQ7Z7G0 1075 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 TTC7BQ86TV6 843 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 HOOK3Q86VS8 718 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 BBOF1Q8ND07 529 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 MCUQ8NE86 351 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 MRGPRX2Q96LB1 330 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 GPR174Q9BXC1 333 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 CXorf56Q9H5V9 222 aa11.52□□□□□ -0.57
SNHG3-202ENST00000437681 MRM3Q9HC36 420 aaKnown RBP11.52□□□□□ -0.57
SNHG3-202ENST00000437681 SAE1Q9UBE0 346 aaPredicted RBP11.52□□□□□ -0.57
SNHG3-202ENST00000437681 TCRBV7S2A1N4TA0A589 114 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 GPR89AB7ZAQ6 455 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SYPP08247 313 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 GPR89BP0CG08 455 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 BCKDHBP21953 392 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 STC1P52823 247 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SARNPP82979 210 aaKnown RBP11.51□□□□□ -0.57
SNHG3-202ENST00000437681 PTK6Q13882 451 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 CDKN3Q16667 212 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 QPCTQ16769 361 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SLC41A1Q8IVJ1 513 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 TMEM145Q8NBT3 493 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 COG1Q8WTW3 980 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 MAGOHBQ96A72 148 aaKnown RBP11.51□□□□□ -0.57
SNHG3-202ENST00000437681 AGAP3Q96P47 875 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SEPT10Q9P0V9 454 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SERGEFQ9UGK8 458 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 CDC23Q9UJX2 597 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 ATXN1LP0C7T5 689 aaKnown RBP11.51□□□□□ -0.57
SNHG3-202ENST00000437681 ACSL1P33121 698 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 RABIFP47224 123 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 WNT3AP56704 352 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 KIAA1024LP59773 190 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 PTK2BQ14289 1009 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 ERCC6LQ2NKX8 1250 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 ESRP1Q6NXG1 681 aaKnown RBP11.51□□□□□ -0.57
SNHG3-202ENST00000437681 LIPIQ6XZB0 460 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 LEKR1Q6ZMV7 388 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 TMC3Q7Z5M5 1100 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 MNS1Q8NEH6 495 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 RUBCNQ92622 972 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 PLEKHG4BQ96PX9 1271 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SLC17A9Q9BYT1 436 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 PKD2L2Q9NZM6 624 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 SLC6A14Q9UN76 642 aa11.51□□□□□ -0.57
SNHG3-202ENST00000437681 PRR23AA6NEV1 266 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 AFF3P51826 1226 aaKnown RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 SGCGQ13326 291 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 ARHGEF7Q14155 803 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 SLC1A5Q15758 541 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TECPR1Q7Z6L1 1165 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 FAM71DQ8N9W8 422 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBL1YQ9BQ87 522 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 GORASP1Q9BQQ3 440 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 SLC6A17Q9H1V8 727 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 CAPN10Q9HC96 672 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 PCDHB9Q9Y5E1 797 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 THADAQ6YHU6 1953 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 C5orf42Q9H799 3197 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3DA0A087WVF3 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3IA0A087WXS9 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3EA0A087X179 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3KA0A087X1G2 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 A0A1W2PQU0 124 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 A0A1W2PR77 199 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3FA6NER0 549 aaPredicted RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 A6NNZ2 444 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3LB9A6J9 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 PDE2AO00408 941 aaPredicted RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 ECEL1O95672 775 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3HP0C7X1 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TSHRP16473 764 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 NPY2RP49146 381 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 EPHB1P54762 984 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 MAXP61244 160 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 ARHGAP8P85298 464 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TAF1AQ15573 450 aaPredicted RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 ZNF423Q2M1K9 1284 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 C11orf91Q3C1V1 193 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3GQ6DHY5 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3CQ6IPX1 549 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 CCDC137Q6PK04 289 aaKnown RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 ADAMTSL4Q6UY14 1074 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 PPP1R21Q6ZMI0 780 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 TBC1D3Q8IZP1 549 aaPredicted RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 CENPTQ96BT3 561 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 BIRC7Q96CA5 298 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 OXNAD1Q96HP4 312 aaPredicted RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 EXOC2Q96KP1 924 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 NSMCE3Q96MG7 304 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 RBM15Q96T37 977 aaKnown RBP eCLIP11.5□□□□□ -0.571e-8■■□□□ 14.3
SNHG3-202ENST00000437681 TMEM121Q9BTD3 319 aa11.5□□□□□ -0.57
SNHG3-202ENST00000437681 C6orf106Q9H6K1 298 aaPredicted RBP11.5□□□□□ -0.57
SNHG3-202ENST00000437681 ZFR2Q9UPR6 939 aaKnown RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms