RNA–Protein interactions for RNA: ENST00000437201.5

SBDSP1-203, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 1 (best)

Gene SBDSP1, Length 839 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-203ENST00000437201 SNIP1Q8TAD8 396 aaKnown RBP17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 DNAJC7Q99615 494 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 ZNF670Q9BS34 389 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 ANP32EQ9BTT0 268 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 CLPBQ9H078 707 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 WDR26Q9H7D7 661 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 B4GALT6Q9UBX8 382 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 AMACRQ9UHK6 382 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 PNMA8BQ9ULN7 279 aaPredicted RBP17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 PADI4Q9UM07 663 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 NENFQ9UMX5 172 aa17.6■□□□□ 0.41
SBDSP1-203ENST00000437201 APC2O95996 2303 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 PSMD11O00231 422 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 AKR1B10O60218 316 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 USP12O75317 370 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 VIPR1P32241 457 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 EIF2S3P41091 472 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 GARSP41250 739 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 ITKQ08881 620 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 MMRN1Q13201 1228 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 ARHGEF7Q14155 803 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 DPYSL3Q14195 570 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 PAFAH1B3Q15102 231 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 IFI16Q16666 785 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 ZFYVE27Q5T4F4 411 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 ARMC12Q5T9G4 340 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 PNCKQ6P2M8 343 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 RBM44Q6ZP01 1051 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 USP45Q70EL2 814 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 PDZD3Q86UT5 571 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 PGBD5Q8N414 524 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 TEX26Q8N6G2 289 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 POLR1EQ9GZS1 481 aaKnown RBP17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 GULP1Q9UBP9 304 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 GPR34Q9UPC5 381 aa17.59■□□□□ 0.41
SBDSP1-203ENST00000437201 URB1O60287 2271 aaKnown RBP17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 TTC24A2A3L6 582 aaPredicted RBP17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 A8MX80 341 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 TMEM253P0C7T8 217 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 MX2P20592 715 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 TGM2P21980 687 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 CA4P22748 312 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 CCNCP24863 283 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 MAN1A1P33908 653 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 GJC1P36383 396 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 LSSP48449 732 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 ARSEP51690 589 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 MAXP61244 160 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 GALNT2Q10471 571 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 ISXQ2M1V0 245 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 TBC1D25Q3MII6 688 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 ANKRD20A8PQ5CZ79 823 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 PLA2G15Q8NCC3 412 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 FATE1Q969F0 183 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 FUBP1Q96AE4 644 aaKnown RBP17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 NUS1Q96E22 293 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 SCRN2Q96FV2 425 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 COQ10AQ96MF6 247 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 ZNF578Q96N58 590 aaPredicted RBP17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 RBM15Q96T37 977 aaKnown RBP eCLIP17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 TSPY26PQ9H489 355 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 POLR1BQ9H9Y6 1135 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 NT5MQ9NPB1 228 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 PHPT1Q9NRX4 125 aaPredicted RBP17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 PCDHB1Q9Y5F3 818 aa17.58■□□□□ 0.4
SBDSP1-203ENST00000437201 MATN3O15232 486 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 HEXIM1O94992 359 aaKnown RBP17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 PGLSO95336 258 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 CD48P09326 243 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 GABREP78334 506 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 CNGA3Q16281 694 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 NCBP2-AS2Q69YL0 99 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 PCDH19Q8TAB3 1148 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 CCDC42Q96M95 316 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 NSMCE3Q96MG7 304 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 ZNF830Q96NB3 372 aaPredicted RBP17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 TSGA13Q96PP4 275 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 SEMA3CQ99985 751 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 CCDC3Q9BQI4 270 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 DNPEPQ9ULA0 475 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 PPIL1Q9Y3C6 166 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 RAI2Q9Y5P3 530 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 ADAMTS20P59510 1910 aa17.57■□□□□ 0.4
SBDSP1-203ENST00000437201 NBEAQ8NFP9 2946 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 ITPR1Q14643 2758 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 TMX2-CTNND1H3BSU7 103 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 TLX3O43711 291 aaPredicted RBP17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 MFSD11O43934 449 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 DXOO77932 396 aaKnown RBP17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 CELA2BP08218 269 aaPredicted RBP17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 MYCLP1P12525 358 aaPredicted RBP17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 ARHGAP25P42331 645 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 ERVPABLB-1P60509 514 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 TRAF2Q12933 501 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 SPIDRQ14159 915 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 ASTE1Q2TB18 679 aaPredicted RBP17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 ATP13A4Q4VNC1 1196 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 PERM1Q5SV97 790 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 TAF8Q7Z7C8 310 aa17.56■□□□□ 0.4
SBDSP1-203ENST00000437201 VSTM4Q8IW00 320 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms