RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 SLC9A8Q9Y2E8 581 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 PDE4DIPQ5VU43 2346 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 FAM227AF5H4B4 570 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 SPAM1P38567 509 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 MMRN1Q13201 1228 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 SLC10A6Q3KNW5 377 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 ATP13A5Q4VNC0 1218 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 GPAT3Q53EU6 434 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 IL27RAQ6UWB1 636 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 CCDC81Q6ZN84 652 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 Q6ZVU0 165 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 TMEM156Q8N614 296 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 FAM111AQ96PZ2 611 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 TMEM209Q96SK2 561 aa12.18□□□□□ -0.46
UBE3B-203ENST00000434735 CDCA3Q99618 268 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-203ENST00000434735 IQCF5A8MTL0 148 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 KHNYNO15037 678 aaKnown RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 SDC3O75056 442 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 MT-CYBP00156 380 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PGAM1P18669 254 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 CRADDP78560 199 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PARP6Q2NL67 630 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PCID2Q5JVF3 399 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 RNASE11Q8TAA1 199 aaKnown RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 C5orf34Q96MH7 638 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 MAT2BQ9NZL9 334 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 GRXCR2A6NFK2 248 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 CYP1A1P04798 512 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 EPCAMP16422 314 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 NT5EP21589 574 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 KCNA3P22001 575 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 KDELR1P24390 212 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 TAC4Q86UU9 113 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 SLC22A9Q8IVM8 553 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 FOXJ1Q92949 421 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 CNBD2Q96M20 576 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 NDC1Q9BTX1 674 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PALMDQ9NP74 551 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 A8MUA0 341 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 CST3P01034 146 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 SNHG28P0DPA3 235 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PRLRP16471 622 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 TYRP1P17643 537 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PLOD1Q02809 727 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 LRRC26Q2I0M4 334 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 TRPC4APQ8TEL6 797 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 C7orf43Q8WVR3 580 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 SERPINB12Q96P63 405 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 SH3GL1Q99961 368 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 COQ6Q9Y2Z9 468 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 ATRNL1Q5VV63 1379 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 RHOQP17081 205 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PSMA4P25789 261 aaKnown RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PGDP52209 483 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 WDR5P61964 334 aaKnown RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 SLC13A2Q13183 592 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 C1orf61Q13536 156 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 ZNF621Q6ZSS3 439 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 UBE2R2Q712K3 238 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 RIBC1Q8N443 379 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 MTERF3Q96E29 417 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 TEPSINQ96N21 525 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 NDNQ99608 321 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 THTPAQ9BU02 230 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 RBM12Q9NTZ6 932 aaKnown RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 ZNF232Q9UNY5 417 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PCDHA3Q9Y5H8 950 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 MCIDASD6RGH6 385 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 NR5A2O00482 541 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 ZNF865P0CJ78 1059 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 CHRNB3Q05901 458 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 PUS10Q3MIT2 529 aaKnown RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 GALNT4Q8N4A0 578 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 EMID1Q96A84 441 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-203ENST00000434735 NCKIPSDQ9NZQ3 722 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 POLG2Q9UHN1 485 aa12.17□□□□□ -0.46
UBE3B-203ENST00000434735 ASTN1O14525 1302 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 RAD51CO43502 376 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 USP1O94782 785 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 GLI1P08151 1106 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SLC35G6P0C7Q6 338 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 ITPKAP23677 461 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SHHQ15465 462 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 LRRC36Q1X8D7 754 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SRLQ86TD4 932 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 OR2W6PQ8NHA6 318 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 CARD9Q9H257 536 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 IKZF4Q9H2S9 585 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 KLC4Q9NSK0 619 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SNX10Q9Y5X0 201 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 CES2O00748 559 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 MMP20O60882 483 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 FGF1P05230 155 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 FEN1P39748 380 aaKnown RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 WNT3AP56704 352 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 NTHL1P78549 312 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 CAPN13Q6MZZ7 669 aaPredicted RBP12.16□□□□□ -0.46
UBE3B-203ENST00000434735 CHSY3Q70JA7 882 aa12.16□□□□□ -0.46
UBE3B-203ENST00000434735 SERINC5Q86VE9 423 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms