RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 SCN8AQ9UQD0 1980 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 ASCC3Q8N3C0 2202 aaKnown RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 LAMA1P25391 3075 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 GOLGA6CA6NDK9 693 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 GOLGA6BA6NDN3 693 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 PSMD11O00231 422 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 LZTS3O60299 673 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 FOXD2O60548 495 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 HEXIM1O94992 359 aaKnown RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 CFIP05156 583 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 ALPIP09923 528 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 GOLGA6DP0CG33 693 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 ZNF30P17039 623 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 TGM1P22735 817 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 LHCGRP22888 699 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 HNF1BP35680 557 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 KCNJ1P48048 391 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 AFF3P51826 1226 aaKnown RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 LMNB2Q03252 620 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 GALNT3Q14435 633 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 STAT4Q14765 748 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 AGERQ15109 404 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 TEAD4Q15561 434 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 CNGA3Q16281 694 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 CRTC1Q6UUV9 634 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 SYT10Q6XYQ8 523 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 KDELC2Q7Z4H8 507 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 CREG2Q8IUH2 290 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 TMEM145Q8NBT3 493 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 DENND6BQ8NEG7 585 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 IPMKQ8NFU5 416 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 ATL2Q8NHH9 583 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 FAM174AQ8TBP5 190 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 SKA1Q96BD8 255 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 LRRC45Q96CN5 670 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 SRPK1Q96SB4 655 aaKnown RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 FSD1LQ9BXM9 530 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 NUSAP1Q9BXS6 441 aaKnown RBP13.11□□□□□ -0.31
MCF2L-215ENST00000433807 SMOC1Q9H4F8 434 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 CAPN10Q9HC96 672 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 AASDHPPTQ9NRN7 309 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 GOLGA6AQ9NYA3 693 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 PAK5Q9P286 719 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 RNF14Q9UBS8 474 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 SLC6A14Q9UN76 642 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 HS3ST3A1Q9Y663 406 aa13.11□□□□□ -0.31
MCF2L-215ENST00000433807 A0A1W2PR77 199 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 A8MX80 341 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 PATE3B3GLJ2 98 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 WNT9AO14904 365 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 VILLO15195 856 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 PSMD3O43242 534 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 PHF2O75151 1096 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 METTL18O95568 372 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 ATXN1LP0C7T5 689 aaKnown RBP13.1□□□□□ -0.31
MCF2L-215ENST00000433807 HLA-DPA1P20036 260 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 CD38P28907 300 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 FDFT1P37268 417 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 FNTAP49354 379 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 SLC1A5Q15758 541 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 C4orf22Q6V702 233 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 PRR23CQ6ZRP0 262 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 TSPAN33Q86UF1 283 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 IQCHQ86VS3 1027 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 RAVER1Q8IY67 606 aaKnown RBP13.1□□□□□ -0.31
MCF2L-215ENST00000433807 CBARPQ8N350 705 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-215ENST00000433807 MFSD2AQ8NA29 543 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 CENPTQ96BT3 561 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 CAPZA3Q96KX2 299 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 C16orf45Q96MC5 204 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-215ENST00000433807 COQ10AQ96MF6 247 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 SMIM14Q96QK8 99 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 KLF6Q99612 283 aaPredicted RBP13.1□□□□□ -0.31
MCF2L-215ENST00000433807 MAGEE1Q9HCI5 957 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 FZD3Q9NPG1 666 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 KCTD5Q9NXV2 234 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 COQ6Q9Y2Z9 468 aa13.1□□□□□ -0.31
MCF2L-215ENST00000433807 WDR87Q6ZQQ6 2873 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 FPGTO14772 594 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 RAD51BO15315 384 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 MAGEC1O60732 1142 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 RECQL5O94762 991 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-215ENST00000433807 TUBB4AP04350 444 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 FGF1P05230 155 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 SYPP08247 313 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 ETS1P14921 441 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 RPL22P35268 128 aaKnown RBP13.09□□□□□ -0.31
MCF2L-215ENST00000433807 ADRA1AP35348 466 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 COILP38432 576 aaPredicted RBP13.09□□□□□ -0.31
MCF2L-215ENST00000433807 CSNK1EP49674 416 aaKnown RBP13.09□□□□□ -0.31
MCF2L-215ENST00000433807 IRX4P78413 519 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 PTSQ03393 145 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 OVGP1Q12889 678 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 ACOX1Q15067 660 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 PTPRRQ15256 657 aa13.09□□□□□ -0.31
MCF2L-215ENST00000433807 SF3A2Q15428 464 aaKnown RBP13.09□□□□□ -0.31
MCF2L-215ENST00000433807 CDKN3Q16667 212 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms