RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 TMEM143Q96AN5 459 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MSANTD3Q96H12 275 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 WNK4Q96J92 1243 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MRI1Q9BV20 369 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC3Q9BY71 257 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 MAGIXQ9H6Y5 334 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CWH43Q9H720 699 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 EVA1BQ9NVM1 165 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 THG1LQ9NWX6 298 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GMIPQ9P107 970 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ADAM30Q9UKF2 790 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 DMTF1Q9Y222 760 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 HEY1Q9Y5J3 304 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 A0A096LPK6 155 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PRORSD1PA6NEY8 169 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CYB561D2O14569 222 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 EIF4EBP3O60516 100 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 HSD17B1P14061 328 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GRIA4P48058 902 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RAB25P57735 213 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SRSF11Q05519 484 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 HDDC2Q7Z4H3 204 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 BBS7Q8IWZ6 715 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 C1orf127Q8N9H9 656 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SNX31Q8N9S9 440 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 C9orf43Q8TAL5 461 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CPT1BQ92523 772 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CCNL2Q96S94 520 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 P2RX7Q99572 595 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RBM4BQ9BQ04 359 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RBM4Q9BWF3 364 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 OBP2AQ9NY56 170 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 AKAP7Q9P0M2 348 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TSC22D4Q9Y3Q8 395 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SNNO75324 88 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ATP6V1G2O95670 118 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CLPTM1O96005 669 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 KCNA3P22001 575 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LPOP22079 712 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 YWHAQP27348 245 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 GTF2H3Q13889 308 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LSM12Q3MHD2 195 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PSRC1Q6PGN9 363 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 LRRC74BQ6ZQY2 392 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FBXO39Q8N4B4 442 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SLC35F5Q8WV83 523 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 RNF25Q96BH1 459 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 PPP1R10Q96QC0 940 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 CDCA3Q99618 268 aaPredicted RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 TMEM121Q9BTD3 319 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 EPHX3Q9H6B9 360 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 ATXN10Q9UBB4 475 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 SCML2Q9UQR0 700 aa3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FAM32AQ9Y421 112 aaKnown RBP3.78□□□□□ -1.8
SHPRH-205ENST00000433355 FAM92AA1XBS5 289 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 GSAPA4D1B5 854 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 ULK1O75385 1050 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 CCDC166P0CW27 439 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 ATP5C1P36542 298 aaKnown RBP3.78□□□□□ -1.81
SHPRH-205ENST00000433355 TSFMP43897 325 aaKnown RBP3.78□□□□□ -1.81
SHPRH-205ENST00000433355 TMEM62Q0P6H9 643 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 ADIGQ0VDE8 80 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 CYP2A13Q16696 494 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 HECTD3Q5T447 861 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 CHADLQ6NUI6 762 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 ZDHHC14Q8IZN3 488 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 TMEM132CQ8N3T6 1108 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 EPS8L3Q8TE67 593 aaKnown RBP3.78□□□□□ -1.81
SHPRH-205ENST00000433355 IPCEF1Q8WWN9 437 aaPredicted RBP3.78□□□□□ -1.81
SHPRH-205ENST00000433355 CPA5Q8WXQ8 436 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 TRIM63Q969Q1 353 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 PDLIM5Q96HC4 596 aaKnown RBP3.78□□□□□ -1.81
SHPRH-205ENST00000433355 ELOVL6Q9H5J4 265 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 OSGEPQ9NPF4 335 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 SNX6Q9UNH7 406 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 LZTS1Q9Y250 596 aa3.78□□□□□ -1.81
SHPRH-205ENST00000433355 TTLL8A6PVC2 850 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 UROSP10746 265 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PSMC3P17980 439 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 NR4A1P22736 598 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SOX6P35712 828 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 CHN2P52757 468 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 GPR17Q13304 367 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PDAP1Q13442 181 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ARHGEF7Q14155 803 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TRIP10Q15642 601 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 TRIP13Q15645 432 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ARMC4Q5T2S8 1044 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZNF765Q7L2R6 523 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 MRPL10Q7Z7H8 261 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 PRPF39Q86UA1 669 aaKnown RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SLC35B4Q969S0 331 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 SPDL1Q96EA4 605 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 AURKBQ96GD4 344 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZNF556Q9HAH1 456 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 IL1RAPQ9NPH3 570 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 FANCFQ9NPI8 374 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 MTF2Q9Y483 593 aaPredicted RBP3.77□□□□□ -1.81
SHPRH-205ENST00000433355 KIF26BQ2KJY2 2108 aa3.77□□□□□ -1.81
SHPRH-205ENST00000433355 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms