RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 FLNBO75369 2602 aaKnown RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 GOLGA6CA6NDK9 693 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 GOLGA6BA6NDN3 693 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 RNF8O76064 485 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 GOLGA6DP0CG33 693 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 ITIH1P19827 911 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 KELP23276 732 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 MLLT3P42568 568 aaPredicted RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 CSNK1DP48730 415 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 AP1S1P61966 158 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 IL10RBQ08334 325 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 SLC10A7Q0GE19 358 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 SRSF6Q13247 344 aaKnown RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 EIF3IQ13347 325 aaKnown RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 ZNF235Q14590 738 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 TGIF1Q15583 401 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 CERCAMQ5T4B2 595 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 AFMIDQ63HM1 303 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 SPECC1LQ69YQ0 1117 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 PLEKHA7Q6IQ23 1121 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 CLEC17AQ6ZS10 378 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 CYP4V2Q6ZWL3 525 aaPredicted RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 PELI3Q8N2H9 469 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 GPR156Q8NFN8 814 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 ECHDC3Q96DC8 303 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 NUS1Q96E22 293 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 NSMCE3Q96MG7 304 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 TMEM74Q96NL1 305 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 GBP4Q96PP9 640 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 CCNL2Q96S94 520 aaPredicted RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 SYT11Q9BT88 431 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 GOLGA6AQ9NYA3 693 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 CWC15Q9P013 229 aaKnown RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 MYO1AQ9UBC5 1043 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 CNOT8Q9UFF9 292 aaKnown RBP13.95□□□□□ -0.18
SEC13-211ENST00000431352 SEPT3Q9UH03 358 aa13.95□□□□□ -0.18
SEC13-211ENST00000431352 PRSS38A1L453 326 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 TMEM191CA6NGB0 347 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 EIF3CLB5ME19 914 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 TMX2-CTNND1H3BSU7 103 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 J3QKU1 62 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 NOBOXO60393 691 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 GLB1P16278 677 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 GM2AP17900 193 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 CCKBRP32239 447 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 ANP32AP39687 249 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 MAZP56270 477 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 POLR2LP62875 67 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 DPYSQ14117 519 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 ARHGEF7Q14155 803 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 RFTN1Q14699 578 aaPredicted RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 LBRQ14739 615 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 CNGA3Q16281 694 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 SMTNL2Q2TAL5 461 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 AMZ1Q400G9 498 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 MAP9Q49MG5 647 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 C14orf28Q4W4Y0 310 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 PHF19Q5T6S3 580 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 TMCO4Q5TGY1 634 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 E4F1Q66K89 784 aaPredicted RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 PPP1R2P3Q6NXS1 205 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 SPRED1Q7Z699 444 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 OR6C4Q8NGE1 309 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 SNRNP27Q8WVK2 155 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 HSPH1Q92598 858 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 EIF3CQ99613 913 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 HAUS4Q9H6D7 363 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 CARS2Q9HA77 564 aaKnown RBP13.94□□□□□ -0.18
SEC13-211ENST00000431352 LRIT1Q9P2V4 623 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 SSUH2Q9Y2M2 353 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 PCDHGC4Q9Y5F7 938 aa13.94□□□□□ -0.18
SEC13-211ENST00000431352 PRAMEF33A0A0G2JMD5 474 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 CFAP69A5D8W1 941 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 CAPN8A6NHC0 703 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 LRRC10BA6NIK2 292 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 H3BRJ5 948 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 PRAMEF10O60809 474 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 LRCH4O75427 683 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 CPP00450 1065 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 FTLP02792 175 aaPredicted RBP13.93□□□□□ -0.18
SEC13-211ENST00000431352 TCF4P15884 667 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 GNPDA1P46926 289 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 RENBPP51606 427 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 MAPK10P53779 464 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 TYRO3Q06418 890 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 PNCKQ6P2M8 343 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 ZNF571Q7Z3V5 609 aaPredicted RBP13.93□□□□□ -0.18
SEC13-211ENST00000431352 VASH2Q86V25 355 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 HEATR4Q86WZ0 1026 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 MED8Q96G25 268 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 WBP1Q96G27 269 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 PSKH2Q96QS6 385 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 ZWILCHQ9H900 591 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 PCDHGA7Q9Y5G6 932 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 PIEZO2Q9H5I5 2752 aa13.93□□□□□ -0.18
SEC13-211ENST00000431352 TENM4Q6N022 2769 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 DDX3XO00571 662 aaKnown RBP eCLIP13.92□□□□□ -0.185e-9■■■□□ 15.5
SEC13-211ENST00000431352 MYCLP1P12525 358 aaPredicted RBP13.92□□□□□ -0.18
SEC13-211ENST00000431352 AMPD1P23109 780 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms