RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 DDX56Q9NY93 547 aaKnown RBP10.2□□□□□ -0.78
ATG4B-212ENST00000430617 RNF14Q9UBS8 474 aa10.2□□□□□ -0.78
ATG4B-212ENST00000430617 PCSK1NQ9UHG2 260 aa10.2□□□□□ -0.78
ATG4B-212ENST00000430617 SFMBT1Q9UHJ3 866 aa10.2□□□□□ -0.78
ATG4B-212ENST00000430617 RABGEF1Q9UJ41 708 aa10.2□□□□□ -0.78
ATG4B-212ENST00000430617 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.2□□□□□ -0.78
ATG4B-212ENST00000430617 NAV3Q8IVL0 2385 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SVILO95425 2214 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 hCG_1818297A0A087WSY0 165 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 ZNF487B1APH4 448 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 C9orf172C9J069 976 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 PRPSAP2O60256 369 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 CEP104O60308 925 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 RNGTTO60942 597 aaKnown RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 CLDN1O95832 211 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 ASLP04424 464 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 PRKCGP05129 697 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 CDKN2BP42772 138 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SSR1P43307 286 aaKnown RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 CXCR3P49682 368 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 STK19P49842 368 aaPredicted RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 HNRNPKP61978 463 aaKnown RBP eCLIP10.19□□□□□ -0.784e-8■■■■□ 24.7
ATG4B-212ENST00000430617 DEUP1Q05D60 604 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 EIF3IQ13347 325 aaKnown RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 KLF1Q13351 362 aaPredicted RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 NNTQ13423 1086 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SIX1Q15475 284 aaPredicted RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 DPYSL2Q16555 572 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 CA9Q16790 459 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SEL1L2Q5TEA6 688 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 C1QL3Q5VWW1 255 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 MFSD7Q6UXD7 560 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SPOCD1Q6ZMY3 1216 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 Q6ZSR6 202 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 ABI3BPQ7Z7G0 1075 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 FAM131BQ86XD5 332 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 VSIG1Q86XK7 387 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SLC13A5Q86YT5 568 aaPredicted RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 PSTKQ8IV42 348 aaKnown RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 MFN1Q8IWA4 741 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 KDM1BQ8NB78 822 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 C9orf43Q8TAL5 461 aaPredicted RBP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 FIBINQ8TAL6 211 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 RAPGEF5Q92565 580 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 FAF2Q96CS3 445 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 IFT43Q96FT9 208 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 SERPINB11Q96P15 392 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 BOCQ9BWV1 1114 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 ANLNQ9NQW6 1124 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 GPR27Q9NS67 375 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.19□□□□□ -0.78
ATG4B-212ENST00000430617 DDIT4Q9NX09 232 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 STIM2Q9P246 746 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 AP4E1Q9UPM8 1137 aa10.19□□□□□ -0.78
ATG4B-212ENST00000430617 A0A1W2PQU0 124 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 LRRD1A4D1F6 860 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 SLC7A4O43246 635 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 AQP9O43315 295 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 MSI1O43347 362 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 GCATO75600 419 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 SLU7O95391 586 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 F9P00740 461 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 IGLV3-27P01718 113 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 FGGP02679 453 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 CSF2P04141 144 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 SRPRAP08240 638 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 CD48P09326 243 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 JMJD7P0C870 316 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 NME1P15531 152 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 AIF1P55008 147 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 COPS2P61201 443 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 NME3Q13232 169 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 DPYSL3Q14195 570 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 ELAVL3Q14576 367 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 ZNF284Q2VY69 593 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 KRTAP21-3Q3LHN1 58 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 FAM133BQ5BKY9 247 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 ZC3H12AQ5D1E8 599 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 PITRM1Q5JRX3 1037 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 TPRG1LQ5T0D9 272 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 MPP7Q5T2T1 576 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 CCDC181Q5TID7 509 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 APCDD1Q8J025 514 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 CEP112Q8N8E3 955 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 WDR48Q8TAF3 677 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 LMX1AQ8TE12 382 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 HSPH1Q92598 858 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 USP7Q93009 1102 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 ABHD17AQ96GS6 310 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 SLC39A13Q96H72 371 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 FCRL2Q96LA5 508 aaPredicted RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 BMFQ96LC9 184 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 PRICKLE1Q96MT3 831 aaPredicted RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 KCTD15Q96SI1 283 aaPredicted RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 ZNF670Q9BS34 389 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 PCDH18Q9HCL0 1135 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 OLA1Q9NTK5 396 aaKnown RBP10.18□□□□□ -0.78
ATG4B-212ENST00000430617 GPATCH2LQ9NWQ4 482 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 ARHGEF38Q9NXL2 777 aa10.18□□□□□ -0.78
ATG4B-212ENST00000430617 NCKIPSDQ9NZQ3 722 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms