RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 INO80CQ6PI98 192 aaPredicted RBP13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 OR6C4Q8NGE1 309 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 CCDC97Q96F63 343 aaPredicted RBP13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 COQ10AQ96MF6 247 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 GFM1Q96RP9 751 aaKnown RBP13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 FOXP3Q9BZS1 431 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 TMEM168Q9H0V1 697 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 LRRN3Q9H3W5 708 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 ETNK2Q9NVF9 386 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 SEPT3Q9UH03 358 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 APPL1Q9UKG1 709 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 BPTFQ12830 3046 aa13.1□□□□□ -0.31
DEPDC7-203ENST00000427755 A0A1W2PQC6 194 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 A8MX80 341 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 EFSO43281 561 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 PLA2G2AP14555 144 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 TCF4P15884 667 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 CCKBRP32239 447 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 UGT1A5P35504 534 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 PCK1P35558 622 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 RENBPP51606 427 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 INHBCP55103 352 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 POLR2LP62875 67 aaKnown RBP13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 ZFP36L1Q07352 338 aaKnown RBP13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 EIF3IQ13347 325 aaKnown RBP13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 HLTFQ14527 1009 aaKnown RBP eCLIP13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 DPYSL2Q16555 572 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 ANO6Q4KMQ2 910 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 CERCAMQ5T4B2 595 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 PNCKQ6P2M8 343 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 RAB11FIP2Q7L804 512 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 TAF8Q7Z7C8 310 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 CCNJLQ8IV13 435 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 CBARPQ8N350 705 aaPredicted RBP13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 PGBD5Q8N414 524 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 FBXO39Q8N4B4 442 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 LZTR1Q8N653 840 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 CCL4L1Q8NHW4 92 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 ZNF653Q96CK0 615 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 ZNF599Q96NL3 588 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 NAP1L5Q96NT1 182 aaPredicted RBP13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 BPIFA3Q9BQP9 254 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 SEMA4CQ9C0C4 833 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 WDR26Q9H7D7 661 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 EPB41L5Q9HCM4 733 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 TMEM63CQ9P1W3 806 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 B4GALT6Q9UBX8 382 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 PCDHGA7Q9Y5G6 932 aa13.09□□□□□ -0.31
DEPDC7-203ENST00000427755 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 FUCA1P04066 466 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 HGFP14210 728 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 PNLIPP16233 465 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 GLB1P16278 677 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 SLC5A2P31639 672 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 ANP32AP39687 249 aaKnown RBP13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 CNGA3Q16281 694 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 TMPRSS9Q7Z410 1059 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 POLNQ7Z5Q5 900 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 SPRED1Q7Z699 444 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 Q8N9G6 341 aaPredicted RBP13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 FAM46DQ8NEK8 389 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 TMEM74Q96NL1 305 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 NUDCD1Q96RS6 583 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 MGME1Q9BQP7 344 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 ISCUQ9H1K1 167 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 ZWILCHQ9H900 591 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 CYP4F12Q9HCS2 524 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 ACSL6Q9UKU0 697 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 ATXN7L1Q9ULK2 861 aaPredicted RBP13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 PCDHGC4Q9Y5F7 938 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 SCINQ9Y6U3 715 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 RNF215Q9Y6U7 377 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 RP1P56715 2156 aa13.08□□□□□ -0.32
DEPDC7-203ENST00000427755 MGAQ8IWI9 3026 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 A0A1B0GTH6 734 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 PRSS38A1L453 326 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 H3BRJ5 948 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 TMX2-CTNND1H3BSU7 103 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 MAFKO60675 156 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 SOCS5O75159 536 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 HEXIM1O94992 359 aaKnown RBP13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 MBD3O95983 291 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 MYBL1P10243 752 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 SKILP12757 684 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 LHCGRP22888 699 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 AMPD1P23109 780 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 KELP23276 732 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 KLHL30Q0D2K2 578 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 TRAF2Q12933 501 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 ACOX1Q15067 660 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 SMTNL2Q2TAL5 461 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 C14orf28Q4W4Y0 310 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 KIAA1614Q5VZ46 1190 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 SPECC1LQ69YQ0 1117 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 TXNRD3NBQ6F5E7 133 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 ZNF605Q86T29 641 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 C17orf82Q86X59 251 aaPredicted RBP13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 NRROSQ86YC3 692 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms