RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 AASDHQ4L235 1098 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ATXN7L2Q5T6C5 722 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 N4BP2L1Q5TBK1 243 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ANKRD33Q7Z3H0 272 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 PARGQ86W56 976 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 COLGALT2Q8IYK4 626 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 GPR135Q8IZ08 494 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 IRGQQ8WZA9 623 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 USP6NLQ92738 828 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CLIP3Q96DZ5 547 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 EFHD1Q9BUP0 239 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 MRPL1Q9BYD6 325 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 LRMDAQ9H2I8 198 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 UBE2ZQ9H832 354 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 GIMAP4Q9NUV9 329 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 NDUFA13Q9P0J0 144 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 SIRPGQ9P1W8 387 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 VPS51Q9UID3 782 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 WDR27A2RRH5 827 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 GSTA4O15217 222 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 FAM155BO75949 473 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CD48P09326 243 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 MGAT1P26572 445 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ALDH4A1P30038 563 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 IFNA8P32881 189 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 SERPINB5P36952 375 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CSKP41240 450 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 SERPINH1P50454 418 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CDH4P55283 916 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 C16orf72Q14CZ0 275 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 WDR45BQ5MNZ6 344 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 FNBP1LQ5T0N5 605 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 TXNRD3NBQ6F5E7 133 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ZNF438Q7Z4V0 828 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 STRA8Q7Z7C7 330 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ALYREFQ86V81 257 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 GFM2Q969S9 779 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 EME1Q96AY2 570 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 MRPL38Q96DV4 380 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 FIZ1Q96SL8 496 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 GRIP2Q9C0E4 1043 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 MTRRQ9UBK8 725 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 WARS2Q9UGM6 360 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 LGALS13Q9UHV8 139 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CCDC88AQ3V6T2 1871 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CLUHO75153 1309 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 GLRA3O75311 464 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 RPN2P04844 631 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ALOX15P16050 662 aaPredicted RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CTGFP29279 349 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CCNFP41002 786 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 NR2C2P49116 596 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 NUDT2P50583 147 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 NRLP54845 237 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 HDAC4P56524 1084 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 FOXM1Q08050 763 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ITGA9Q13797 1035 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 RAB33AQ14088 237 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 TRMT5Q32P41 509 aaKnown RBP10.68□□□□□ -0.7
TCOF1-204ENST00000427724 SLC26A9Q7LBE3 791 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 PHYKPLQ8IUZ5 450 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ZDHHC14Q8IZN3 488 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 CPT1BQ92523 772 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 FGF13Q92913 245 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 NELL2Q99435 816 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ACAT2Q9BWD1 397 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 ASF1AQ9Y294 204 aa10.68□□□□□ -0.7
TCOF1-204ENST00000427724 PTGESO14684 152 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 USP1O94782 785 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 KAT7O95251 611 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 PIGRP01833 764 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CYP1A1P04798 512 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 RHOQP17081 205 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 YBEYP58557 167 aaPredicted RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CDK18Q07002 472 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 PLA2G4EQ3MJ16 856 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 TLDC1Q6P9B6 456 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 STRADAQ7RTN6 431 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 GJD3Q8N144 294 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 ZNF614Q8N883 585 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 MCOLN3Q8TDD5 553 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 VAT1Q99536 393 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 KLHL4Q9C0H6 718 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 TBX21Q9UL17 535 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 ADAMTS7Q9UKP4 1686 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 H3BM21 787 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 HAS3O00219 553 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 ABLIM1O14639 778 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 STAU1O95793 577 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 ASLP04424 464 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 CDKN2BP42772 138 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 C6orf10Q5SRN2 563 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 RNASEH2BQ5TBB1 312 aaKnown RBP10.67□□□□□ -0.7
TCOF1-204ENST00000427724 SYPL2Q5VXT5 272 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 LAYNQ6UX15 382 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 FAM151BQ6UXP7 276 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 Q6ZVU0 165 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 POLNQ7Z5Q5 900 aa10.67□□□□□ -0.7
TCOF1-204ENST00000427724 LZICQ8WZA0 190 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms