RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 RALGPS1Q5JS13 557 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 AADACL2Q6P093 401 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 GLRX5Q86SX6 157 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 PDCD7Q8N8D1 485 aaKnown RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 LRRC57Q8N9N7 239 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 PIH1D2Q8WWB5 315 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 FUBP1Q96AE4 644 aaKnown RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 CNDP2Q96KP4 475 aaKnown RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 IL12RB2Q99665 862 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 C1QTNF7Q9BXJ2 289 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 HEMGNQ9BXL5 484 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 BRD8Q9H0E9 1235 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 PACSIN2Q9UNF0 486 aaPredicted RBP13.67□□□□□ -0.22
SNX3-204ENST00000426155 CHKBQ9Y259 395 aa13.67□□□□□ -0.22
SNX3-204ENST00000426155 MAP1BP46821 2468 aaKnown RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 BTNL10A8MVZ5 291 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 K7ESM1 405 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 PPP1R12AO14974 1030 aaPredicted RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 TNFSF14O43557 240 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 HEXIM1O94992 359 aaKnown RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 PRLP01236 227 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 CSF2P04141 144 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 MYF5P13349 255 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 NME1P15531 152 aaKnown RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 ZFXP17010 805 aaPredicted RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 CLDN6P56747 220 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 PDK1Q15118 436 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 RFLNAQ6ZTI6 216 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 HSD11B1LQ7Z5J1 315 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 RAB44Q7Z6P3 723 aaPredicted RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 ZC3H18Q86VM9 953 aaKnown RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 MARCH9Q86YJ5 346 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 ZNF548Q8NEK5 533 aaPredicted RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 LPCAT1Q8NF37 534 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 EXD1Q8NHP7 514 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 FAM174AQ8TBP5 190 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 ALG3Q92685 438 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 COQ10AQ96MF6 247 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 CNTNAP3BQ96NU0 1288 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 AGAP3Q96P47 875 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 MCCC1Q96RQ3 725 aaPredicted RBP13.66□□□□□ -0.22
SNX3-204ENST00000426155 CDC6Q99741 560 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 CNTNAP3Q9BZ76 1288 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 OCEL1Q9H607 264 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 C10orf88Q9H8K7 445 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 PHTF1Q9UMS5 762 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 MYLKQ15746 1914 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 ACACBO00763 2458 aa13.66□□□□□ -0.22
SNX3-204ENST00000426155 F5H423 210 aaPredicted RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 ENC1O14682 589 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 SIGLEC6O43699 453 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 ZRANB2O95218 330 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX3-204ENST00000426155 LDOC1O95751 146 aaPredicted RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 FTCDO95954 541 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 CELA2BP08218 269 aaPredicted RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 JUNDP17535 347 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 TGM2P21980 687 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 HNF1BP35680 557 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 ETV3P41162 512 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 SKOR1P84550 965 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 SHC2P98077 582 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 C1orf61Q13536 156 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 TFDP2Q14188 446 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 AGERQ15109 404 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 PRKD1Q15139 912 aaPredicted RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 LRRC66Q68CR7 880 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 MACC1Q6ZN28 852 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 NT5DC3Q86UY8 548 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 DCP2Q8IU60 420 aaKnown RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 RCOR2Q8IZ40 523 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 KIAA1524Q8TCG1 905 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 NUS1Q96E22 293 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 SCRN2Q96FV2 425 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 RBM41Q96IZ5 413 aaKnown RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 RBM15Q96T37 977 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX3-204ENST00000426155 FAM118BQ9BPY3 351 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 APOOQ9BUR5 198 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 PCDH9Q9HC56 1237 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 AMACRQ9UHK6 382 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 CD84Q9UIB8 345 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.65□□□□□ -0.22
SNX3-204ENST00000426155 CAPN6Q9Y6Q1 641 aa13.65□□□□□ -0.22
SNX3-204ENST00000426155 GOLGA4Q13439 2230 aaKnown RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 TPRP12270 2363 aaKnown RBP13.65□□□□□ -0.22
SNX3-204ENST00000426155 A0A0J9YYE9 177 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 A0A1W2PQ67 120 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 DKK1O94907 266 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 TRBC1P01850 177 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 C1SP09871 688 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 PTPN3P26045 913 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 CTNNA2P26232 953 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 PEX5P50542 639 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 EPHB1P54762 984 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 HNRNPKP61978 463 aaKnown RBP eCLIP13.64□□□□□ -0.23
SNX3-204ENST00000426155 YPEL5P62699 121 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 WASHC5Q12768 1159 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 KIF5AQ12840 1032 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 ZNF211Q13398 564 aaPredicted RBP13.64□□□□□ -0.23
SNX3-204ENST00000426155 MTM1Q13496 603 aa13.64□□□□□ -0.23
SNX3-204ENST00000426155 GALNT3Q14435 633 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 354.4 ms