RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 PLSCR3Q9NRY6 295 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 CCM2LQ9NUG4 571 aaPredicted RBP11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 SLAMF8Q9P0V8 285 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 INVSQ9Y283 1065 aa11.33□□□□□ -0.6
SEC61A1-202ENST00000424880 M0R3G1 203 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 EGFRP00533 1210 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CD68P34810 354 aaPredicted RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 HLCSP50747 726 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 TMBIM6P55061 237 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 TRIM32Q13049 653 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 EMC2Q15006 297 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 PGM5Q15124 567 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 INSCQ1MX18 579 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 TRIM71Q2Q1W2 868 aaKnown RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 TSTD2Q5T7W7 516 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 FAM131BQ86XD5 332 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SPARTQ8N0X7 666 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CLEC4FQ8N1N0 589 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 TXNDC5Q8NBS9 432 aaKnown RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 RAB2BQ8WUD1 216 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 P2RY11Q96G91 374 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 EGLN2Q96KS0 407 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 C3orf30Q96M34 536 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 RHNO1Q9BSD3 238 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 VRTNQ9H8Y1 702 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SMURF2Q9HAU4 748 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 MOV10Q9HCE1 1003 aaKnown RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 GGA3Q9NZ52 723 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CRNNQ9UBG3 495 aaPredicted RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 LINC00854A0A1B0GVQ3 168 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 ZSCAN5BA6NJL1 495 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SEC14L2O76054 403 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 KCNK2O95069 426 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 ALBP02768 609 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 GPD2P43304 727 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 MPP1Q00013 466 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SAMD4BQ5PRF9 694 aaKnown RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 GTF2IRD2BQ6EKJ0 949 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 PMF1Q6P1K2 205 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CATSPER4Q7RTX7 472 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 GTF2IRD2Q86UP8 949 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 STK32CQ86UX6 486 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CCDC103Q8IW40 242 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 FAM83FQ8NEG4 500 aaPredicted RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 DNERQ8NFT8 737 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SYTL5Q8TDW5 730 aaPredicted RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CDK5RAP1Q96SZ6 601 aaKnown RBP11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CPNE1Q99829 537 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 C2orf40Q9H1Z8 148 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 SPC25Q9HBM1 224 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 CNGB3Q9NQW8 809 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 TMEM181Q9P2C4 612 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 PMF1-BGLAPU3KQ54 211 aa11.32□□□□□ -0.6
SEC61A1-202ENST00000424880 MEN1O00255 615 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 HCRTO43612 131 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 HTR1AP08908 422 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 NMBRP28336 390 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 FMO4P31512 558 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ACADSBP45954 432 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 MAP2K4P45985 399 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 POLD2P49005 469 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CXCR3P49682 368 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SEMA5AQ13591 1074 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ADPRMQ3LIE5 342 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CCNYL2Q5T2Q4 361 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 GRTP1Q5TC63 336 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ARHGEF16Q5VV41 709 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 TXNDC11Q6PKC3 985 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 PRR23CQ6ZRP0 262 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ADCK1Q86TW2 530 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 FUNDC1Q8IVP5 155 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CENPLQ8N0S6 344 aaPredicted RBP11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SCML4Q8N228 414 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 MFSD2AQ8NA29 543 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CENPNQ96H22 339 aaPredicted RBP11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ZFYVE19Q96K21 471 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 C9orf16Q9BUW7 83 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 VPS33BQ9H267 617 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 HACD3Q9P035 362 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 UBIAD1Q9Y5Z9 338 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ARPC2O15144 300 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ASNA1O43681 348 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 MFSD11O43934 449 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 DGAT1O75907 488 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 PRKACGP22612 351 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ECT2LQ008S8 904 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 PTPN11Q06124 597 aaPredicted RBP11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 RFTN1Q14699 578 aaPredicted RBP11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 DUOXA2Q1HG44 320 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 BROXQ5VW32 411 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 ZNF773Q6PK81 442 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 KIAA0408Q6ZU52 694 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 KCNMB4Q86W47 210 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 COLGALT2Q8IYK4 626 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SFRP1Q8N474 314 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 CELF2-AS1Q8N7Q2 184 aa11.31□□□□□ -0.6
SEC61A1-202ENST00000424880 SPERTQ8NA61 448 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms