RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 FGD3Q5JSP0 725 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 C9orf57Q5W0N0 161 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 OGFOD2Q6N063 350 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 LYSMD3Q7Z3D4 306 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 DHFR2Q86XF0 187 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 SPPL2CQ8IUH8 684 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 BIRC8Q96P09 236 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 PAIP1Q9H074 479 aaKnown RBP14.39□□□□□ -0.11
MSH5-206ENST00000423982 PLGRKTQ9HBL7 147 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 NCKIPSDQ9NZQ3 722 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 SLC8A2Q9UPR5 921 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 TRPC5OSA6NMA1 111 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 GPR182O15218 404 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 TLE2Q04725 743 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 STX5Q13190 355 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 NOMO2Q5JPE7 1267 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 CYHR1Q6ZMK1 362 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 TMEM26Q6ZUK4 368 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 DEFB128Q7Z7B8 93 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 C3orf30Q96M34 536 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 GAD1Q99259 594 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 DNAI2Q9GZS0 605 aa14.39□□□□□ -0.11
MSH5-206ENST00000423982 MRPL46Q9H2W6 279 aaKnown RBP14.39□□□□□ -0.11
MSH5-206ENST00000423982 UBFD1O14562 309 aaKnown RBP14.38□□□□□ -0.11
MSH5-206ENST00000423982 BMP10O95393 424 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 MT-ND1P03886 318 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SNRPB2P08579 225 aaKnown RBP14.38□□□□□ -0.11
MSH5-206ENST00000423982 OXTRP30559 389 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CHRNA4P43681 627 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CLCN2P51788 898 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CAPRIN1Q14444 709 aaKnown RBP14.38□□□□□ -0.11
MSH5-206ENST00000423982 PRPSAP1Q14558 356 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 PPP4R4Q6NUP7 873 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 DHRS4L2Q6PKH6 230 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 FAM35AQ86V20 835 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 FUNDC1Q8IVP5 155 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SLC43A3Q8NBI5 491 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 IPMKQ8NFU5 416 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SNX27Q96L92 541 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 TMEM181Q9P2C4 612 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CROTQ9UKG9 612 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SQORQ9Y6N5 450 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 TET1Q8NFU7 2136 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 YJEFN3A6XGL0 299 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 H0YJX3 145 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 NRP2O60462 931 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 GPC4O75487 556 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 DAB1O75553 588 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CYP2C18P33260 490 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 PSMD8P48556 350 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 NPY2RP49146 381 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 RPL34P49207 117 aaKnown RBP14.38□□□□□ -0.11
MSH5-206ENST00000423982 CDH17Q12864 832 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 LRRC8DQ7L1W4 858 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CUZD1Q86UP6 607 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 OSTM1Q86WC4 334 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SH3RF2Q8TEC5 729 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 CYGBQ8WWM9 190 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 UHRF1Q96T88 793 aaPredicted RBP14.38□□□□□ -0.11
MSH5-206ENST00000423982 SNX25Q9H3E2 840 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 ARMC7Q9H6L4 198 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SLC38A7Q9NVC3 462 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 BLOC1S6Q9UL45 172 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 SH3GLB1Q9Y371 365 aa14.38□□□□□ -0.11
MSH5-206ENST00000423982 NME4O00746 187 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 XPOTO43592 962 aaKnown RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 SRP72O76094 671 aaKnown RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 POMCP01189 267 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 COL6A2P12110 1019 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 AXLP30530 894 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 HK2P52789 917 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 TUBA4AP68366 448 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 BNIP3Q12983 259 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 TBCELQ5QJ74 424 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 ZNF470Q6ECI4 717 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 UNC93AQ86WB7 457 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 HM13Q8TCT9 377 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 EDEM1Q92611 657 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 NT5C3BQ969T7 300 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 PBXIP1Q96AQ6 731 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 ERLEC1Q96DZ1 483 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 OLFM1Q99784 485 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 ADI1Q9BV57 179 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 KIFC1Q9BW19 673 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 NPLQ9BXD5 320 aaPredicted RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 CXorf21Q9HAI6 301 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 WDR6Q9NNW5 1121 aaKnown RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 PRDM5Q9NQX1 630 aaPredicted RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 SMIM28A0A1B0GU29 152 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 A8MT66 165 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 H3BMQ9 156 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 GIPC1O14908 333 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 ALDOCP09972 364 aaKnown RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 MAP3K7CLP57077 242 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 NUP107P57740 925 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 SOX4Q06945 474 aaPredicted RBP14.37□□□□□ -0.11
MSH5-206ENST00000423982 TNK2Q07912 1038 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 SQLEQ14534 574 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 ZBED5Q49AG3 693 aa14.37□□□□□ -0.11
MSH5-206ENST00000423982 PAN2Q504Q3 1202 aaKnown RBP14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms