RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 A0A1W2PQ67 120 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 TCRBV7S2A1N4TA0A589 114 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 PDE2AO00408 941 aaPredicted RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 TRAFD1O14545 582 aaPredicted RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 DFNA5O60443 496 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 PGLSO95336 258 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 ALPIP09923 528 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 CD59P13987 128 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 CES1P23141 567 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 VIPR1P32241 457 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 PTPN7P35236 360 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 IGFALSP35858 605 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 RABIFP47224 123 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 NR2C2P49116 596 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 COPS2P61201 443 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 IFI35P80217 286 aaPredicted RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 SIM1P81133 766 aaPredicted RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 ADCY2Q08462 1091 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 SLC14A1Q13336 389 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 ZNF423Q2M1K9 1284 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 KYAT3Q6YP21 454 aaKnown RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 BBS12Q6ZW61 710 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 DPPA4Q7L190 304 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 IQCHQ86VS3 1027 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 SPATS2Q86XZ4 545 aaKnown RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 OXR1Q8N573 874 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 TEX26Q8N6G2 289 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 TMEM145Q8NBT3 493 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 DENND6BQ8NEG7 585 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 UBE2Q2Q8WVN8 375 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 VOPP1Q96AW1 172 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 ECHDC3Q96DC8 303 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 IFT43Q96FT9 208 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 NSMCE3Q96MG7 304 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 OLFM3Q96PB7 478 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 RBM15Q96T37 977 aaKnown RBP eCLIP9.71□□□□□ -0.86
HERC3-204ENST00000422770 NAP1L3Q99457 506 aaPredicted RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 CARD6Q9BX69 1037 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 C1QTNF2Q9BXJ5 285 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 AP1M1Q9BXS5 423 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 BRD8Q9H0E9 1235 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 PCDH9Q9HC56 1237 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 MBNL1Q9NR56 388 aaKnown RBP9.71□□□□□ -0.86
HERC3-204ENST00000422770 AMACRQ9UHK6 382 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 MOSPD1Q9UJG1 213 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 HS3ST3A1Q9Y663 406 aa9.71□□□□□ -0.86
HERC3-204ENST00000422770 LRP4O75096 1905 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 A0A0U1RQS6 177 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 A0A1B0GTQ1 180 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 MED19A0JLT2 244 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 NPIPB15A6NHN6 443 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 YKT6O15498 198 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 FFAR2O15552 330 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 FLRT2O43155 660 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 HTRA2O43464 458 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 RECQL5O94762 991 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 STK10O94804 968 aaKnown RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 TJP3O95049 919 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 PDHA1P08559 390 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 ZNF883P0CG24 379 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 CEACAM1P13688 526 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 CSRP1P21291 193 aaKnown RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 PTPN3P26045 913 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 EIF3EP60228 445 aaKnown RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 OTUD4Q01804 1114 aaKnown RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 NIPAL4Q0D2K0 466 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 RALGDSQ12967 914 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 TUBB2AQ13885 445 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 GALNT3Q14435 633 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 PRKD1Q15139 912 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 PTPRRQ15256 657 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 TCEA2Q15560 299 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 CNGA3Q16281 694 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 TAZQ16635 292 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 CCDC70Q6NSX1 233 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 DARS2Q6PI48 645 aaKnown RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 LIPIQ6XZB0 460 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 PID1Q7Z2X4 250 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 RD3Q7Z3Z2 195 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 ABI3BPQ7Z7G0 1075 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 TSPAN33Q86UF1 283 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 CDKL3Q8IVW4 592 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 RASGEF1CQ8N431 466 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 EID2Q8N6I1 236 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 LRRN4CLQ8ND94 238 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 FAM174AQ8TBP5 190 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 MAIP1Q8WWC4 291 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 ATG4AQ8WYN0 398 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 FATE1Q969F0 183 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 NUS1Q96E22 293 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 BMFQ96LC9 184 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 QKIQ96PU8 341 aaKnown RBP eCLIP9.7□□□□□ -0.86
HERC3-204ENST00000422770 IL12RB2Q99665 862 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 TUBB2BQ9BVA1 445 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 TDRD1Q9BXT4 1180 aaKnown RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 SUDS3Q9H7L9 328 aaPredicted RBP9.7□□□□□ -0.86
HERC3-204ENST00000422770 C10orf88Q9H8K7 445 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 UBP1Q9NZI7 540 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 FTSJ1Q9UET6 329 aa9.7□□□□□ -0.86
HERC3-204ENST00000422770 RSPH14Q9UHP6 348 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms